Anoplopoma fimbria (sablefish): 129096362
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Entry
129096362 CDS
T09102
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129096362 (rhbdl3)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
129096362 (rhbdl3)
Peptidases and inhibitors [BR:
afb01002
]
Serine peptidases
Family S54: Rhomboid family
129096362 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
DUF5580_M
EF-hand_5
EF-hand_11
AIF-1
EF-hand_9
EF-hand_8
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
129096362
NCBI-ProteinID:
XP_054461104
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Position
9:22235391..22286447
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AA seq
414 aa
AA seq
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MEKSSPRMAGATREAPVNSSPAVASNAEGEEIEVLESTDVLPVAPEDQWKSLFDKFDPEN
SGFISTERFRDLLATHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRA
ILQGSRQLKGCSLRDEAGLGLSQRLVRHVAYETLPREVDRKWYFDSYTYCPPPWLILAIT
IAEVAVFMYYGFQMERLVLQVSSPSFLKSPLPYHPQLRAQAWRYLSYIFMHTGIEHLSLN
MAMQLLVGVPLEMVHGALRIGLVYACGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLA
NVVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVVVG
LTLGVVVLQNYEQRLQEQSLFWIFFCVYTLFVLCAVFWNIFAYSLLDVRLPPPP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagcagcccgaggatggcgggcgcaacccgggaggcgcctgtgaactcctct
ccggcggtggcgtccaacgcggagggcgaagagatcgaggttttggaaagcaccgatgtt
ctccccgtggctccagaggaccaatggaagtctctgtttgacaagtttgacccagagaat
tcgggcttcatcagtacggagcggttcagggacctgctagcgacccacggctctgagctt
gacccccacaaactggaagttctattggccctcgccgatggcaacgccgacgggaagatc
tgctaccaagactttgtcaacctgatgagtaacaagcgctccaacagtttccggagggcc
atcctgcagggtagcaggcagctgaagggctgtagtctcagagatgaggccggcttgggg
ctgtctcaacggctggtccgacacgtcgcctacgagaccctgccccgcgaggtcgaccgc
aagtggtacttcgacagctacacctactgtcccccaccctggctcatcctggctataacc
attgctgaggtagccgtgttcatgtactatgggttccagatggagcgcttggtcctgcag
gtatccagcccgtccttcctaaagagccccttaccttaccacccacagctacgcgcccag
gcctggagatacctcagctacatcttcatgcacactgggattgaacacctgagcctgaac
atggccatgcagctgctggtgggagtccctctagaaatggtccacggagccctgcggatt
ggactggtctacgcgtgtggtgtgctggcagggtctctggcagtgtctgtcaccgacatg
acggctccagtggtcggctcatccgggggagtgtacgctctggtctcagctcatttggcc
aatgtggttatgaattggtcgggaatgaagtgtcagtttaagttattccggatggccatg
gctctggtttgcatgagcgtagagtttggtcgggcggtgtggctgcggttctatcccccg
gcctttcctccgtgccccaatcccagcttcgtagctcacctgggaggggtggtggttggc
ctgacgctgggtgtggtggtcctgcagaactacgagcagcgactccaggagcagtccctg
ttttggatcttcttctgcgtctacaccttgttcgtgctctgcgctgtcttctggaacatc
ttcgcctacagcttgctggacgtgcgactgcccccgccgccttga
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