Anoplopoma fimbria (sablefish): 129096452
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Entry
129096452 CDS
T09102
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129096452 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129096452 (trip12)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129096452 (trip12)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
HECT type E3
129096452 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
129096452
NCBI-ProteinID:
XP_054461215
LinkDB
All DBs
Position
1:complement(10294233..10319323)
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AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQIKHKANSPPESRRPNSKASKAT
ASSATGQSRGHSSRRSGLTLSVASFVLQDEPEAAGTSEQERPAHQSKSEGTRGLKRSEAP
DQISTFGPTPAKKPKSLPPPRDNTSETKKGPAKSKKRSLAPEVPALTGRGQSKKSGAAGA
SPIQKRKKADSLPGLSSTAGPLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGPNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESESFLVTSPPKACP
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRTAG
VSGLARAPPKDSISNNRDKIRAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTATEQ
LNLQVDGGMECLVEISSIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRDLLSRDVRLKRF
LHVFAGCPVQGMEPVGRLDPAENGPYLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPSVINPLETYLTSEPPETITFEDPSLEVNLLLRVLHSISRYWFYLYDNAVC
KEIINTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRA
MLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYMFSSK
GLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMSIS
SHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDF
TLPGFPNIELKKGGKDFPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIM
REKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagttgcaggaaggttgcagtcagagcagataaaa
cataaagcaaattccccacctgaaagtagaagacctaattctaaggcttccaaagccaca
gccagctcagccactggccagtccagagggcacagctcaagaagaagcggtcttactctg
tccgtggcttcatttgtgttgcaagacgagccagaggctgcagggacatctgagcaagag
cgaccagcccaccagtcaaagagcgaaggcacccgtgggcttaagcgaagcgaagctcct
gaccaaattagtacctttggacccacccctgccaagaagcccaaatcgctcccaccaccc
agagacaatacctcagagaccaagaaaggcccagctaagtccaagaagagatcacttgct
ccagaagtacctgcattgacaggtcgaggtcagagtaagaagagcggggccgctggggcc
tcaccaatccagaaacggaagaaagcggactccctccccggtctaagtagcaccgctggg
cccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacggactcctcctcctctgcctccacc
tcttcttcttcctccaccacaggccccaacagcgccaccacgcagggcgcccgagttaaa
cagggaaaagatcagaccaaggcacgacgctctcgctctgcctcaagcccctccccacgc
cgtagtacccgagacaaggagcaggctaaaaccgccagctcttcaaagtttgagtgggca
gcgcgcttcaaccccaaagtcaacctgccaaaacccaaactgtccttgcccggatcctcc
aaaactgagacctccaaacctgggccatcaggattacaagctaaactagcaagtttgagg
aaatccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgtcaggagaaaatggccgactccgacaacaaccag
gatggggccaactcatcagccgctcgcaccgatgaggcatcacaaggggcttcagcttca
agctcagttgctggagcagtgggcatgaccacctctggagagagtgagtcggatgactct
gaaatgggaaggcttcaagccctactggaggccaggggtctccccccacatctctttggg
cccctcggaccccggatgtcacagctctttcacaggaccattggcagtggagcgagctcc
aaggctcagcagttactgcagggcctgcaggccacaggtgacgagtctcagcagctccaa
gctgccattgagatgtgccagctgctggtgatgggcaatgaggaaacacttggtggattc
cctgtcaagagtgtggtgcccgctttgattacactgttacaaatggagcataactttgat
attatgaatcatgcctctcgtgcactcacgtatatgatggaggctctccctcgatcctct
gctgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccaatttatt
gacgtagcagagcaggccctgactgccttggagatgttgtcaaggcgacacagcaaagcc
atcttgcaggctggtgggctcgctgattgcctcctctacctggagttcttcagcatcaat
gctcagaggaatgccttggccatcgcagccaactgctgccagagcattactccagacgag
ttccactttgttgctgattctctgccactgttgactcagagactcacacaccaggataaa
aaatcagtcgaaagcacttgcctctgtttcgccagactggtggacaactttcaacatgag
gagaacctgttgcaggaggtggcgtcacgggacctgttgaccaacattcagcagctgctg
gtggtgacccctcctgtgctcagctcggggatgtttatcatggttgtgcgcatgttttcc
ttgatgtgctccaactgcccctgcctggcagtccagcttatgaaacagaacatagcagaa
actctgcgtttcctcttgtgtggtgcatcaaatggcagctgccaggagcagatcgaactg
gtaccccggagccctcaggagctctatgaactgacctcactcatatgtgagctgatgccc
tgcctgcccagagaaggcatctttgcagttgatgtcatgctgaagaagggcagcgcccag
acgacagagggagcgatctggcagtggagggatgaccgtggtctgtggcatccctacaac
cgcattgacagccgcatcattgagacagcacaccagaacggggaggatgagatcagcttg
tcaaccctgggccgtgtgtacacaattgactttaactctatgcagcagattaatgaagac
acaggaacagcacgtggtatccagaggaaacccaatcctcttgccaaccccaatacaggg
agtcaccaggaggttcgtcgagaggatgcacgagcccagttgatgaaggaggaccctgag
ctggcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagctcatca
gccggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctactttgct
gatgcagagctgctgaaggatgtgctgaggaatcatgctgtgtccagtcacattgcctcc
atgctatccagccaggacctgaagattgtggttggttctcttcagatggctgagatcctc
atgcagaagctgcctgatgtgttcagtgtctacttcagaagagaaggtgtgatgcaccag
gtgaagaacctttcagaatctgagagctttctagtcactagtcccccaaaggcttgcccg
agtggtactgccagtctgtgcactaccaccatcagcactgcatccaccacatctgctaat
aatgcaactcctgatctgggctcacccagtttccagcacagcatggatgactcactggac
ctcagcccacagggacggttaagtgatgtcctaaagaggaaacggcttcctaaaagaggg
cccaggaggcccaagtactctcccccaagagatgatgataaagtagacaatcaggccaag
agccctaccagtactcagtcacccaagtcctccttcttggccagtcttaatcccaagacc
tggggcaagctgggtgcgcagaccaacaatgctaactctgagccctcacgcacagcggga
gtgagtggcctggcaagggctcctcccaaggactcaatttcaaataacagagacaaaata
agagcctggataaaagaacaggcaagtaagtttgtggagcgctacttcaactctgaaaat
gtggacggcagcaaccctgcactgaatgtactccagagactttgcacagccacagagcag
ctcaacctgcaggttgacggtggtatggagtgcctggtggagatctccagtattgtatca
gaatctgacgtgtcgtcttttgagatccagcacagtgggctggtgaagcagctgctggtc
tacctgacctcaaacacagaccgggacttgcttagccgtgatgtgcggctcaagaggttc
ctccatgtgttcgctggctgtccggttcaaggaatggagcccgtaggtcgtctggaccca
gcagagaatggcccatatctggcactggtgcacaaaatgaacagctgcctgagtcaaatg
gagcagttcccggtcaaagtgcatgatttccccagtggcaacggcaatggcagcaggggc
tctcaggcactgaagttcttcaacacacaccagctcaagtgtcagctgcagagacaccca
gactgcactaacgttaaacagtggaaaggcggccctgtgaagatagaccccctggctctg
gtgcaagccattgagagatatcttgttgtcagaggttacggccgaatcagagaagaggat
gaagacagtgatgacgatggttcagatgatgagatcgatgaatccctggcggcgcagttc
ctgaattctgggagtgtgcgtcacagactgcaattctacatcggcgaccacctgctgcca
tacaacatgactgtgtaccaggctgtccggcagtacagtcttcaagcagaagaagaaaga
gagtcgacagacgatgaggcaaacccacttgggcgagctggcatctggaccaaaacgcac
acaatatggtataagcctgtgagagaggacgaggacggcagtaaagacgctgtcggtgga
aagaggggtcgagcccagaccgctcccaccaaaacctcacctcgcaacgccaagaagcaa
gatgagctgtggcatgatggtgtgtgtcccagtgtcatcaatcccttagagacatacctc
acttcggagccaccagagaccataacctttgaggacccctctttagaggtcaacctgctg
ctgagggtcctgcactccatcagtagatactggttctacttgtatgataatgctgtgtgt
aaggaaatcatcaataccactgagttcattaacagtaagctgacagccaaagcgaaccgt
cagctacaagacccgctggtcatcatgacggggaacatccctacttggctcattgagctc
ggaaagacctgtccgttcttcttcccctttgacacccggcagatgttattctacgtaact
gccttcgatcgcgacagagccatgcagcgcttactggacacaaaccctgagatcaaccag
tcagattcccaggacagcagagttgcaccccgtcttgacaggaagaagaggacgattaac
cgcgacgagctgcttaaacaggccgagtctgtgatgcaggacctcggcagctccagggca
atgttggagattcagtatgagaacgaggtcggcacgggtcttggccccactctggagttc
tacgctctggtgtctcaggagcttcagcgggctgatctcggcctgtggaggggcgaagag
gtcacactggccaatcctaaaggaagccaagagggaacaaagtacatgttcagctccaaa
ggactgtttgctgttcccttcggaaggacaaccaaaccagcacacatagccaaaatcaaa
atgaagttccgtttcttaggaaagctaatggccaaagccattatggacttcagattgctg
gacctgcccctagggctgccattttataagtggatgctgcggcatgagatgtccattagc
tcccatgacctggtgaacattgaccccggtgtggcgaagtccatccagcacttggaggat
atcattcgccagaagaagaggctggaacaggaccgatcacagacgagggagaccctgcag
caggccctggagagcctgaacatgaatggttgctcagtggaggacctgggtttggacttc
acccttccaggattccccaacattgagctgaaaaagggcggcaaagactttccagtcaca
atctacaatctggaggagtacctcaggctggtggtgtactggactctaaacgaaggagtg
tccagacaatttgagtcctttagggaagggtttgaatcagtcttccccctgcatcacctg
cagtatttctatccagaggagctcgaccagttgctgtgtggtagcaaatcagagacgtgg
gacgtcaagacgctgatggagtgctgcagaccggaccacggctacacacatgacagccgt
gccgtacggttcctgtttgaggtgctgagcagctttgatgccgagcagcagagactcttt
ctgcagtttgtcacaggaagccccagactgcctgtcggcggtttccggagcctgaatccc
cctctgacgattgtgaggaagacattcgagtcgacagagaacccagatgacttcctcccc
tcagtcatgacctgtgtcaactacctgaagctgcctgactactccagcatagagataatg
agagagaaactgttgattgcggcccgcgagggccaacagtctttccacctttcctga
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integrated database retrieval system
