Anoplopoma fimbria (sablefish): 129096480
Help
Entry
129096480 CDS
T09102
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129096480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129096480
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129096480
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129096480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
TRIM_CC
zf-C3HC4_4
zf-B_box
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
HAP1_N
SSY5_N
Motif
Other DBs
NCBI-GeneID:
129096480
NCBI-ProteinID:
XP_054461251
LinkDB
All DBs
Position
9
Genome browser
AA seq
716 aa
AA seq
DB search
MAEMDASPFSLMSLEDELTCSICLSPFDCPVTIPCGHNFCQDCLLATWKDSYSCPQCRTH
FATKPELKKNTVLSTVVETFNLRTNKSEATPAAEESKAEEEGVIRCDTCMEAEASQTCLT
CMASFCEEHLRPHRENPTFRLHQLSQPLGDLSERICPDHHKLMEFFCSQHSRPICSLCLQ
QVHKGCSFITPEEQRNLQESDLRSKLGLLDGKITKNENVILQMGSLQNKLEDSATNRKKA
LAVEYQQMRDMLTREEREALNIVDRELDSGQTKLNGLAKKLNENVDSLSKAKEEIQSLLS
QSQTQTFLQASFNLPQTVKFEPTAPQINLDSKKMKAAQEFSTLLKEHLTEIFKQPIEARL
LKLKPVEKAVPGSAPASSGSTESQPESEVTKPPKQKKTPRSHSPGRPPVQPLFQPVRMPY
MESHPGWHPPQPPPGYFMRPQFMQGPRTNNNTGILGPQWTGPCPQPKSGPKKKPQKQKPP
QSAEDNMGKRNQSRSVEDLLEMDDKAKDCTPAAESKETPETPDIPPNITSAEKRTELLKY
GTVLNLDPKTAHKRISLSENFTKASVSDEHTSYPDCPERFAVCSQVLASKGFSRGRHYWE
VKLSSNNFIGIGLAYKSIDRKGPTSRLGRNSQSWCVEWFNVKLSAWYNSSETVLVNPNPK
RIGVLLDCEEGTATFYNVADRAYPFHSFVFPFAEAVYPAFWIFSSGSSVSLCKLQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaatggacgcgagtccgttttctctgatgagtctggaggacgagctgacctgc
agcatctgtctgagtcccttcgactgtccggtgaccatcccctgcggacacaacttctgc
caggactgcctcctcgccacctggaaggactcctacagctgtcctcagtgccggacccac
ttcgccaccaaaccggagctgaagaaaaacacggtcctcagcaccgtcgtggagaccttc
aacctgaggacgaacaagagcgaggccaccccggcagcagaggagagcaaagccgaggaa
gagggtgtcatacgctgcgatacgtgtatggaggcagaagcgtcgcagacctgcctcacc
tgcatggcctctttctgtgaggagcacctgcggcctcaccgggagaacccgacctttagg
ctccaccagctgagtcagcccctcggcgacctgtcagagcggatctgcccggaccaccac
aagctgatggagttcttctgcagccaacacagccgccctatctgcagcctctgcctccag
caggtgcacaaaggctgctccttcataacccctgaggagcagaggaacctgcaagagtcc
gacctgaggagcaagttgggtttgctggacgggaagattacgaagaatgagaatgttatt
cttcaaatgggttccttgcagaacaagctagaggactcagcgaccaacaggaagaaggct
ttggcagttgagtatcagcagatgcgggatatgttgacacgggaggagcgtgaagctctg
aatatagtggaccgtgagctggacagtggtcagactaaactaaatggtctcgcaaaaaag
ttaaatgagaacgtcgacagtttgagcaaagccaaagaagagatccagagtctgctgagc
cagtcccaaactcagaccttcctacaggcttcatttaacctgccccaaactgtgaaattt
gaacctactgcccctcaaatcaacctggactccaagaagatgaaagcggcacaggaattc
tctacactgctgaaggagcatctgacagagatatttaaacagcctattgaggccagacta
ctcaaacttaaaccagttgaaaaagcagttcctggctcagcacctgcaagttctggaagt
actgaatctcagccagaatctgaagtaaccaagcctccaaagcagaaaaaaacgcccagg
tcccacagtccaggtcgtccgcccgtccagccattattccagccagttcgtatgccttat
atggagtcacatccaggctggcatccacctcagcctccaccaggctattttatgcgtcct
caatttatgcaaggacctaggacaaataataacactggcattcttgggccacaatggaca
ggtccatgtccccaacccaaatcaggcccaaagaagaaacctcaaaaacaaaaacctccc
caatccgcagaagacaatatggggaaaaggaatcaatcccgttcagtggaggacctgctg
gagatggatgacaaagccaaagactgtactcctgcagctgaatccaaagagacaccagaa
acgccggacattcccccaaacataacatcagctgaaaaaagaaccgaacttctgaaatat
ggtacggttctcaatttggatccaaagacggcccacaaacgcatctcactgagtgaaaac
ttcaccaaggcatctgtgtcagatgaacacacgagctaccccgactgccctgagcgcttt
gccgtctgctcccaggtgctagcctccaagggtttctctagaggacgacactactgggag
gtcaaactgagcagcaacaacttcattggcatcggcttggcttacaaaagcattgaccgc
aaaggtccgaccagtcggctgggacgcaactcccagtcctggtgtgtcgagtggtttaac
gtcaagctgtcagcctggtataacagcagtgagaccgtgctggtgaatcccaatccaaag
cgcataggtgtgctgttggattgtgaggagggtactgctacgttctataacgtggccgac
agggcgtatcccttccactcctttgtgttcccctttgctgaagccgtgtatccagctttc
tggattttctcaagtggctcgtccgtttctttgtgcaagctgcaggcataa
DBGET
integrated database retrieval system
