Anoplopoma fimbria (sablefish): 129096485
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Entry
129096485 CDS
T09102
Symbol
vegfc
Name
(RefSeq) vascular endothelial growth factor C
KO
K05449
vascular endothelial growth factor C/D
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
afb04510
Focal adhesion
afb04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129096485 (vegfc)
04020 Calcium signaling pathway
129096485 (vegfc)
09133 Signaling molecules and interaction
04518 Integrin signaling
129096485 (vegfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129096485 (vegfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129096485 (vegfc)
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Growth factors (RTK binding)
129096485 (vegfc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
CXCXC
Shell_matrix-like_N
Membrane_MLC1
Motif
Other DBs
NCBI-GeneID:
129096485
NCBI-ProteinID:
XP_054461259
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All DBs
Position
9:15630436..15680414
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AA seq
414 aa
AA seq
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MHLLGISLLLAYLLYSNLASDLNDHDDEYEPEQSHAPDSSPKPDMEEKLRSASSVDELMS
LIYPSYWAALKCRSKLSAAPPTFKLQPRRLRPLADTEEPIFAAAYLNLDVLKSIESEWRK
TQCMPREVCVDVGREFGAATNIFYKPPCVSVYRCGGCCHSEDKQCRNISTGYLSKTLFEI
TVPITQGTKPVTISVANHTQCSCLSKLDVYKQVHSIIRRSLPECPIANRTCPPGQSWSSR
QCRCVGLSANVHHNPPPPPLPPPRPSQQHLDTFSADVCGVDKELDVETCQCACRRGDQTQ
DCGPKRHLDRNTCQCVCNIPPAPSCPQNHFFNKDTCQCTCSRTCPRQQPLNKTKCSCECN
ESPNKCFLKGRRFHQATCSCLRPPCEVRRRRCEAGFSFSEEVCRCVPSHWRRLD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcacctactgggaatatctcttttactggcgtatctcctctacagcaacctcgccagc
gacctcaacgaccacgatgatgagtacgagccggagcagagccacgcgccggactcttca
ccaaagccagacatggaggagaagttgcggtcagcctccagtgttgatgaactgatgagt
cttatttatccgtcatactgggccgctctgaagtgcagatccaaactgtcggctgcccct
ccaacattcaagctccagccccgccggctgcggccgctggctgataccgaagagccaata
tttgctgctgcctacctcaacttggatgtcctgaaaagtatagagtcggagtggaggaag
actcagtgcatgcccagggaagtgtgtgtcgacgtgggcagggagttcggggctgccacc
aacatcttctataaaccaccctgtgtgtccgtctacagatgtgggggatgctgccactct
gaagacaaacaatgcaggaatatctccactggttacctcagcaaaactctgtttgagatc
acagtgccgatcacccagggcaccaagccggtgaccatcagtgtggctaaccacacgcag
tgcagctgtctgtccaaactggacgtctacaaacaagttcacagcatcatcaggagatcc
ctgcctgagtgtccaatagccaacaggacgtgtcctcctggtcagtcatggagcagcagg
cagtgtcggtgtgtcggcctgagcgccaatgttcaccacaacccccctcctccaccactg
ccccctccaaggccctcccaacagcaccttgacacattctcagcggatgtttgtggcgta
gataaggagctggacgtggagacctgtcagtgtgcctgtcggcgtggggatcaaacccaa
gactgcggccccaaacgacacctcgaccgcaacacctgtcagtgcgtctgcaatatcccg
cctgctccctcctgccctcagaaccacttcttcaacaaggacacctgccagtgcacatgt
agcaggacgtgtccacgccagcagcccctcaataaaacaaagtgttcctgcgaatgtaac
gagtcgcccaacaagtgcttcctgaagggaaggaggtttcaccaagccacatgcagttgt
ctcaggcctccctgcgaggtaaggaggcgacggtgtgaagcaggtttctccttcagcgag
gaagtgtgtcgctgcgtaccgtcccactggagacgactggactaa
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