Anoplopoma fimbria (sablefish): 129096781
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Entry
129096781 CDS
T09102
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129096781 (vps50)
Membrane trafficking [BR:
afb04131
]
Protein recycling
Others
EARP complex
129096781 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
129096781
NCBI-ProteinID:
XP_054461398
LinkDB
All DBs
Position
10:complement(2803228..2904573)
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AA seq
967 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSMSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQESTPSTDG
AAAAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNM
AQLHEFKFMGQCRSPSVSPSRQAVFSTSPAQEELSLFQQYLQEGNPFEMPAEHKDEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDFVDEQTGDAPLKSASRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMYESSGLGLISSRLRTTLNRIQESLIDMDVGGENAAVHSAAEDRKEKVPSPHLSQLVVL
TNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKRLQDVSRHV
RIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPI
PDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLSAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatggcccggcagggcctgaagagcccccaggagagcatg
gcagacctgagtcctgtggagaacctcaggatccccagcaaggaggagttgcgggagctg
agggagcagcccatcgacccccaggcggagcaggagatcatcgacagcatcgaggaggtc
tacttctctaacgactccttcgacatggtgcagcacgaactggagaaacttccacctgag
ctgaacctgcaggagctggaggagtacagagacaagctgaagagacaacaggcagcagtt
tctaaaaaggtcgctgatcttattctggagaaacagcctgcgtatgtcaaggaactggag
cgtgtgactgcattacaaaccaacctgcagctggcagcggtcatttgcactaatgcaagg
aggcaactgagcatgtcgaaggagggattcacagaagccagcttgggtctattggccaat
cagaggaggcgacagctgctgacaggcctgcttaagtcactgaggaccatcaagacgctg
caaagaacagacgtaagactcagcgagatgcttgaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagc
gaattgaattccaaactacaagacactctggagcaaatagaggagcagcttgacgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcgcactacaccaaggtccagctggcctac
acgctcctgggcaagacacagactgctatggaccagctccacatgcacttcacccaggcc
atccacaacacggtgttccaagtggtgctgggatacgtggagctgtgtgccggcaacgct
gataccaagttccagaagatgcagtacaaggacctgtgcacgcatatcaccctggacagc
tacattccctgcctgacagatctatgcaaggcattgtgggaggtgatgcttagctaccac
cgcaccatgcagtggcacgaggagcatgacaaacaggagagcacacccagtacagatggc
gccgcggcagcagagtctgatgagtcggtggtggaccgcagctacgtgaagaagaagctg
gaacatggactcacacggatctggcaggacgtccagttgaaagtgaaggcctacatcctg
gggactgacatgtctaacttcaagtacgacgacttcattgtggtgcttgatgtcatcagc
aggttgatgcaggtgggcgaggagttctgcggcagcaagtcagaggtcctgcaggagtcc
atcaaacgccagagtgtcaactactttaaaaactatcacagggcacgactggaagagctg
aggatgtttctggaaaatgagacgtgggagctttgcccggtgaagtctaactttaacatg
gcccagctccatgagtttaagttcatgggccagtgtcgttctccgtccgtttccccgagc
agacaggccgtgttctcgaccagcccggctcaggaggagctttctctgttccagcagtac
cttcaggagggaaacccctttgagatgcctgctgagcacaaagacgaggagacagaggat
gtgctggcatctaacgggtacgagtcagacgagctggaaaagagtgtgtatcaagattac
gacagtgacagtgatgtccccgaggagctcaagcaggactttgttgacgagcagacaggt
gacgcccccctcaagagtgcatcccgagaaaccatcagaagcaagaaaaagtccgactac
aaccttaataagaccaatgcaccgatcctcaccaacaccacccttaacgtcatccggctt
gtcgggaagtatatgcagatgatgaacattctgaagccgatcgccttcgatgtcatccac
tgtgtgtcacagctcttcgactactacctgtacgctgtgtacaccttctttggacgcaat
gacatgtatgagtcatcgggtctcggcctcatcagcagcagactgagaaccacactgaac
cggatccaggagagcctcattgacatggatgtagggggggagaatgcagcggtccacagt
gcagcagaggacagaaaggagaaagtgccgagcccccacctcagccaactggtggtcctc
actaacagtgggactctttatgggctagcacagagagtggtggccaccgagtctcttgtg
tttctggccgaacagtttgagtccctccagtcccacctggacacaatgatgcctgcagcc
aagaagcccttcctgcagcagttttattcccagacggtgtctacagccagtgaactccgg
aaaccaatatactggattgttgcagcgaaggccatcgactacgaacaaatgttgctcctg
atggctggcgtcaaatgggacattagggagataatgtcgcagcataatgtgtatgtggac
gtcctgttaaaggagtttgagcaatttaacaagcggttgcaggatgtttccagacatgtg
cgcatcccgctgcctgtgtccaacgtgctgtgggagcactgcatccgcctggccaacagg
actctcgtggaaggctatgctaatgtgaagaaatgcagtaacgagggccgcgccctgatg
cagctggacttccagcagttcctaatgaagctggagaagctgaccgacctgcgacccatt
cctgataaagagtttgttgagacctacatcaaagcctactacctgactgagaatgacatg
gagcagttcatcaagaatcatcgggagtactccatgaagcagctcgccaacttggtgaat
gtttgtctgggttcacatataaacaagaaggctcgccagaaactcctgtcggccatagat
gacattgacaggcccaagagatag
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