Anoplopoma fimbria (sablefish): 129096791 Help Entry 129096791         CDS       T09102                                  Symbol col1a2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism afb  Anoplopoma fimbria (sablefish) Pathway afb04510   Focal adhesion afb04512   ECM-receptor interaction afb04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:afb00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129096791 (col1a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     129096791 (col1a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     129096791 (col1a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:afb00536]     129096791 (col1a2) Glycosaminoglycan binding proteins [BR:afb00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129096791 (col1a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  129096791 NCBI-ProteinID:  XP_054461410 LinkDB All DBs Position 10:complement(2619849..2639853) Genome browser AA seq 1351 aa AA seqDB search MLSFVDTRILLLLAVTSYLATCQSGPRGDKGPRGDRGPQGPNGNDGKPGLPGTAGPPGPP GLGGNFAAQYEGAKAPDAGPGPMGLMGPRGPNGPPGPPGAQGHTGHAGEPGEPGQTGPAG ATGPPGPLGKSGEDGNNGRPGKPGDRGVPGPQGARGFPGTPGLPGMKGHRGYTGLDGRKG ENGGAGAKGEHGAHGSAGSPGLAGSRGMAGERGRAGPAGPAGARGADGNVGPSGPAGPLG SAGPPGFPGGPGPKGEIGPAGASGPSGAQGARGEPGSNGAVGPVGPVGNPGANGLNGAKG PAGTPGVSGAPGFPGPRGGPGPQGPQGAAGQRGLAGDPGVQGIKGDGGPKGEPGNSGPQG SPGPQGEEGKRGPNGELGATGPAGNRGARGSPGSRGAPGSEGRTGPIGMPGARGSTGNGG PRGPPGDAGRAGESGAAGLRGLPGSPGSSGPPGKEGPSGAAGQDGRSGPPGPSGPRGQPG NIGFPGPKGPSGEAGKPGDKGSSGPTGLRGTPGPDGNNGATGATGPAGGPGDKGEQGSSG APGFQGLPGPAGGAGEVGKPGERGIPGDHGVAGPAGVKGERGSSGGAGATGPQGPTGARG PAGAPGTDGGKGEPGAAGAAGGPGHQGPGGMPGERGAAGGPGGKGEKGEGGHRGPDGNSG RDGSRGMPGPAGPPGPTGANGDKGESGGFGPSGPAGARGGSGERGEVGPSGSPGFAGPPG ADGQTGARGERGPGGVKGESGPSGPAGPAGQSGPAGASGPAGPTGGRGDNGPPGLTGFPG AAGRVGGSGSAGIVGPPGLAGPAGKDGPRGLRGDPGSSGPSGEQGMGGPPGVSGEKGPSG ESGPPGSPGAPGTGGPLGLQGFVGLPGARGDRGTPGGLGGLGEPGRVGPPGSSGPRGPAG NIGMPGMTGPQGEAGREGNSGNDGPPGRPGTAGFKGDRGEPGPAGSMGLSGSPGPAGPSG AAGRPGNRGESGPGGPSGPVGAAGARGAAGPAGTRGEKGGAGDKGERGMKGLRGHAGLQG MPGPSGPSGESGAAGSNGPSGPRGPAGPHGPPGKDGRSGGHGTIGSPGARGPPGYVGPAG PAGSPGLPGPPGPAGGGYDVSGYDEYRADQPALRAKDYEVDATLKSLNTQIENMLTPEGS RKNPARTCRDIKLSHPEWSSGFYWIDPNQGCITDAIKVFCDFNTRETCIHAHPESIAHKN WYRSTEGKKHVWFGETINGGTEFTYNDATLSPQSMATQLAFMRLLSNQASQNITYHCKNS NAYMSDETGSLKRAVVIQGSNDVELRAEGNSRFTYSVLEDGCTSHTGEWSKTVIEYRTNK PSRLPILDIAPLDIGGADQEFGLDIGPVCFK NT seq 4056 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatactcggattctgttgctgcttgcagtaacttcatacctagca acatgtcaatcaggtccccgaggagacaaaggacctcgaggtgacaggggtcctcaaggc ccaaatggaaatgatggcaaacctggactccccggcaccgctggcccccctggtccccct ggactcggaggaaactttgctgctcaatatgaaggtgcaaaagctcccgatgccggacct ggacccatgggtctcatgggccctagaggacctaatggaccacctggacctcctggagct cagggacacactggacacgctggtgagcccggagagcctggacagactggccctgctggt gccactggcccccctggaccccttggcaaatctggagaggatggtaacaacggcagacct ggcaagcccggagatagaggtgtccccggcccacagggcgctcgtggattccctggcacc cctggacttccaggaatgaagggacacagaggttatactggtctggatggacgcaaggga gagaacggtggtgctggtgccaagggtgagcatggtgcccacggatctgctggaagtcct ggactggctggatctcgtggtatggctggtgagagaggccgtgccggtcctgctggtcct gctggtgctcgtggcgctgatggcaatgttggaccctctggccctgctggtcccctcgga tctgctggtccccctggtttccccggtggacccggacccaagggagagattggacccgct ggagcttctggcccaagtggagctcagggagctagaggagagcccggttccaatggtgct gttggccccgttggccctgttggaaaccctggtgctaatggcctgaatggagccaaggga cctgctggtacccctggtgtttctggagctcctggcttccccggaccaagaggaggacct ggaccccagggccctcagggtgctgctggacagagaggtctcgctggagatcctggtgta cagggcatcaagggagatggcggacccaaaggagagcctggtaactctggacctcaggga tcccccggacctcagggtgaggagggcaagagaggacccaatggtgagctcggagccact ggacctgctggaaaccgtggagctagaggctcccctggcagccgtggtgcacctggtagc gagggaagaactggcccaattggcatgcccggagcccgtggttccaccggtaatggtgga cctcgtggaccccctggagatgctggccgcgccggtgagtctggtgcagctggtctcagg ggtctcccaggaagccctggaagttccggaccaccaggaaaggagggaccttctggcgcc gctggacaagatggtcgctctggacctcccggcccatccgggcctagaggccagcctgga aacattggtttccccggacccaagggaccttctggtgaggctggcaagcctggagataag ggatcatctggccccactggcctgagaggaacccctggacccgatggcaacaatggagcc actggcgcaactggacctgctggcggtcccggtgataagggagaacaaggatcttctgga gctcctggctttcagggtctgcccggtccagctggaggtgctggagaggttggcaaaccc ggagagagaggaatcccaggagaccatggagttgctggacctgccggggtcaagggagag cgtggtagctctggtggtgccggagctaccggacctcagggaccaactggagcccgtgga cccgctggagcccccggaaccgatggtggcaagggagagcctggtgctgctggagctgct ggtggacctggacaccagggacccggtggaatgcccggagagcgtggagccgctggtgga cctggaggcaagggagagaagggagagggtggacacagaggacccgacggcaattctggc agagatggtagccgtggtatgcctggacccgctggacctcccggacccactggagccaat ggtgataagggtgagagcggtggcttcggaccttccggccctgctggagctcgtggaggc tctggagaacgtggagaggttggaccttctggatctcccggattcgctggaccccctggc gctgatggtcagaccggagcaagaggagagcgtggacctggtggagtcaagggagaaagt ggcccatctggacctgctggacccgctggacagtctggacctgctggtgcttctggccct gctggacctactggtggtcgtggtgacaacggacctcctggtctgactggtttccctggt gctgctggtagagttggtggtagtggttccgctggtattgtcggaccccctggcctcgct ggcccagctggtaaggatggtcctcgtggtctccgtggtgatcctggatccagtggtccc tctggagagcagggtatgggtggaccacctggtgtatctggagagaaaggaccctctgga gagtctggtcctcctggttctcctggtgctcctggaaccggtggtcctcttggacttcag ggattcgttggtctgcctggtgctagaggagatcgtggtacacctggcggtcttggtgga ttgggagagcctggtagagttggacctcctggttcctctggacctcgtggtcccgctggc aacattggcatgcctggtatgaccggaccccagggagaggctggacgtgagggtaactct ggtaatgatggaccccctggtcgtccaggtactgctggattcaagggagaccgtggtgag cccggacctgctggttccatgggactttctggttcccccggacctgctggaccctctgga gctgctggcagacctggaaaccgtggagagagcggcccaggaggtccatctggccctgtt ggagcagctggagctagaggtgccgctggacctgctggaacccgtggtgagaagggaggt gctggagacaagggagagagaggcatgaagggtctgcgtggacatgctggtctccaggga atgcccggaccttctggaccctccggtgagtctggtgctgctggatccaatggaccttct ggaccaagaggacctgctggaccccatggaccccctggtaaggatggtagatctggcggc catggaaccattggctctcctggtgctcgtggaccccctggatacgttggacctgctggt cctgctggatctcccggtctgcccggacctcccggccccgctggtggtggatatgacgtc tctggatacgatgagtacagagctgatcagcccgctctgagagccaaggactacgaggtc gatgccaccctcaagtccctcaacactcagatcgagaacatgctcacccctgagggatcc aggaagaaccccgcccgcacctgccgtgacatcaagctcagccaccccgaatggagcagc ggattctactggattgaccccaaccagggatgcatcactgacgccatcaaggtcttctgc gacttcaacacccgcgagacctgcatccatgcccaccccgagagcatcgcccacaagaac tggtacagaagcaccgagggcaagaagcacgtctggttcggagagaccatcaacggtggt actgagttcacctacaacgatgcgaccctcagcccccagagcatggccacccagctcgcc ttcatgcgcctgctgtccaaccaggccagccagaacatcacctaccactgcaagaacagc aatgcctacatgagtgatgagaccggcagcctgaagagggctgtggtgatccagggctcc aacgatgtggagctgagagccgagggcaacagtcgcttcacctactccgtgctggaggat ggctgcactagtcacactggtgaatggagcaagacagtgattgagtacagaacaaataaa ccatctcgcctccccatcctcgacattgcacctttggacattggtggagctgatcaggag tttggtttggacattggcccagtctgtttcaaataa

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