Anoplopoma fimbria (sablefish): 129096825
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Entry
129096825 CDS
T09102
Symbol
arhgef1a
Name
(RefSeq) rho guanine nucleotide exchange factor 1a isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129096825 (arhgef1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129096825 (arhgef1a)
Membrane trafficking [BR:
afb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129096825 (arhgef1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
C1_2
Prok-RING_1
PH_13
BRISC_FAM175B_helical
PHD
PHDvar_NSD
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
129096825
NCBI-ProteinID:
XP_054461473
LinkDB
All DBs
Position
10:complement(16165807..16274658)
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AA seq
907 aa
AA seq
DB search
MSRVANLSKLRQERMREINLRNKERERMREREKEAREREARYSNGHLFTSLTVSGNTLCS
ACNKSITAKEALSCPTCNVTIHNRCRDTLPNCAKMKQRQQKMALLRNNSAVQNVTLRTKT
PGMRERPSSAIYPSDSFRQSLLGSRRGRSSLSLSKSVSTNNIAGTLNDDSPLGLRRILSQ
STDSLSFRTRAMSVESLNDDGDMYYTSVLEDLDLEGQDFKADSWSTAVDSSYLQTRIKNV
IKRQDVIYELIQTELHHMRTLHIMERVFRQGMLEELQLDLCTVYAMFPCLDQLTRIHSHF
LAQLLLRRNSSLQYGSSRNFTIHQLGDILLEQFSGQCADEMRKTYAEFCSRHLKAVKLYK
ELLARDKKFQCFIRRVSRGPLLRCHGFQECILLVTQRISKYPVLVHRILENTTDDDEEFS
SLAQALSMVRELLSSIDQQMEDLEKTQRLQEIQAKLDPRAEARVRDGGLFKPGELFRRRL
VHDGTLFWKTPGSRLKDTQVLLMTDILVFLQEKDQKYIFPCLDKSPVLSLQNLIVRDIAN
QDRGMFLISDSSPPEMYEFHAASKEDKNLWIRHIQHTVSKCPSREEFPLIETEHKAHLRR
LKADLQQKDREMLELLQERVTLFCELAEVTSGQEALQPAITRYLFRADTPQAPRAEKLLL
DATAEVDRLSELLLGSRVDIPLPSNQNHMEVVETSDQDLLVNGAHDFLASKGCMRNQDKS
PPAKIYQRLVNLSVYLHALQGAVIKQDSILELLLQPQDNVAPAAGGACRPLWRDGGNREA
NAGSSIGELALLQRQHSLLQEELLRLRDAENRFKDSERARAKLERHVRHMKVCSGAAPAS
QQLEELSSQTDSLQPRKGLSTGADTMWAHQSDGLQDGSDLEVDMTSDDDDDTASESSKDL
QDIPEEI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagttgccaatctgtcgaagctgcgacaagagaggatgagggagatcaacctg
cggaataaagagagagagcgcatgagggagcgagagaaggaggcaagggagagggaggca
cgttacagcaatggtcatctcttcacgtcattgacagtgtcaggaaacacactctgttca
gcatgcaacaagagtattactgccaaggaggcgctcagctgccctacatgcaatgtcact
atccacaaccgctgtcgagacactttgccaaactgcgccaaaatgaaacagaggcagcag
aagatggcccttttgcggaataactcagccgtacagaatgtcacgctgcgcacaaaaact
ccaggaatgcgcgagcgtccaagttcagccatctacccttctgacagcttccgacagtcc
ctgctgggatcccgccgtggtcgctccagcctatccctgtccaagagtgtctccaccaac
aacattgcagggaccttgaatgacgactctcccctcgggctgcgcagaatcctttcccag
tctacagactccctcagcttcaggaccagagctatgtcagtggagtctctcaatgatgac
ggagacatgtactatacatcagtattggaggatctggatctggagggccaggactttaag
gctgactcatggagcacggctgtggacagcagctacttgcagacacgcatcaaaaacgtc
atcaagaggcaggatgtaatctatgagctgattcagacagagctgcaccacatgcgaacg
ctgcatatcatggaaagggtgttccggcaaggcatgctggaggagcttcagctggacctt
tgcactgtatatgccatgttcccctgcctggaccagctgaccaggatacactcccatttc
cttgcacagcttctcctgcggcgcaacagcagcctgcagtatggatccagccgcaacttt
accattcaccagctgggggacatactactagagcagttctccggccagtgtgcagacgag
atgcggaagacctatgctgaattttgtagccgccacttgaaggctgtcaaattgtacaag
gaactgcttgccagagacaagaagttccagtgcttcatacggcgggtgagtcgcggaccc
ctgctacgttgccatggttttcaggagtgcatcttgttagtgactcagcggatctccaag
tatcctgtccttgttcatcgcattctggagaataccaccgatgatgacgaagaattctct
tctctggcccaggctctctccatggtcagagaacttcttagttcaatagaccaacagatg
gaggacctggagaaaacacagcgtctgcaagaaatccaggccaagctggacccgcgggct
gaggcaagggtaagggatggtggacttttcaagcctggagagttgttccgccggagactt
gtccatgatgggacccttttctggaaaaccccaggatcccgactcaaagacactcaggtc
ttattgatgacagacatcctggtgtttctgcaggagaaagaccagaaatacatatttcca
tgtctggacaaatctccagtactttcccttcagaacttgatagtgagggatatagccaat
caggatcgtggcatgttcctcatcagtgactcctctcctcctgagatgtacgagttccac
gctgcctcaaaggaggacaaaaacctctggatacgccacatccagcacaccgtcagcaag
tgcccatcacgagaggagttccccctcatagagactgaacacaaggcccatcttaggaga
ctcaaagctgacctccagcagaaggaccgggaaatgctggagctcctgcaggagagggtg
actctattctgtgagctggcagaggtgacaagtggtcaggaggccctacaacctgccatc
acacgctacttgttcagggcagacacaccccaagctccccgtgcagagaaactcctattg
gatgccacagctgaggtcgacaggttgagtgaacttcttctgggttccagggtggacatc
cctcttccatccaatcaaaaccacatggaggtggtagaaaccagtgatcaggatctgttg
gtcaatggagcacatgatttcttagcatcaaagggttgcatgaggaatcaagacaagtcc
ccgcctgcaaagatctatcagaggctggtgaatctcagtgtttacctccatgcactccag
ggtgcagttatcaaacaagactccattttggagctgttgctgcagccacaggataacgtg
gcaccagctgcaggaggagcgtgccgccctctctggcgagatggtggaaatcgtgaagcc
aatgcagggtcaagcatcggggagctggctcttttgcagagacaacacagcctgcttcag
gaggagctgctgaggctgcgagatgcggagaaccggttcaaggacagtgagagggcccgg
gcaaagctggagaggcatgtccgacacatgaaggtctgcagcggggctgcacctgcctcc
cagcagctagaggagctgtcttctcaaactgactctctgcaaccaagaaaggggctctca
actggagctgacaccatgtgggcccaccaatcagatggcctccaggacggcagtgatttg
gaggtagacatgacatcagatgatgatgatgacacagcatctgaaagctccaaggacctt
caagatattccagaggagatctga
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