Anoplopoma fimbria (sablefish): 129096848
Help
Entry
129096848 CDS
T09102
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129096848 (vps52)
Membrane trafficking [BR:
afb04131
]
Protein recycling
Others
EARP complex
129096848 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
129096848 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF3440
Motif
Other DBs
NCBI-GeneID:
129096848
NCBI-ProteinID:
XP_054461502
LinkDB
All DBs
Position
10:complement(23298451..23315550)
Genome browser
AA seq
724 aa
AA seq
DB search
MAEVAAAAAGAAPGVNTAGNPTDEAMAYLQDENTDGDITNLNLGELDLTTDEFILDEVDI
HIQANLEDDLVKEALKTGVDLRQYSKQVESELQRIEQASIKDYIKESQNIALLHNQITAC
DSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPG
AMISTILDSPVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKLKAVSKIR
EFILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYFSY
FKSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTVGQRGSILSPAEL
EGPILVPHTAQRGDSRYPYETLFRSQHYALLDNGCREFLFLSDFFMVTGNSALDLFNSIM
GKTLSMFLKSMSTYVSDCYDSIAIFLCIHIILRFRAITAKRNIPALDKYWEAVLELLWPR
FELILEMNINSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNTLLGQL
LAEVENFVLKMAAEFPSRRDQLIFLMNNYDMMLSVLMERAADDSKEVEGFQQLLLARTQE
FIEEILSPPFGGMIAFVKEAEALMEKGQLDRLKNDEARITQLVRGFSSSWKQSVEAMSQD
VMRSFTNFKNGTSIIQGALTQLIQYYHGFHKILNQPTFRSLAVRSELINLHHLMVEVKKH
KPNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtcgctgctgcagccgccggagctgctcccggtgtgaacacggcggggaac
ccgacggacgaggccatggcgtacctgcaggacgagaacactgatggagacatcaccaac
ctgaacctgggagaactggacctcaccacggatgagttcatcctggatgaagtggacatt
cacatccaggccaatctggaggatgacctcgtgaaggaggcgctcaaaacgggtgttgac
ctccgtcagtactccaaacaggtggagtcagagctgcagaggatcgaacaggcctccatc
aaagactacatcaaggagagtcagaacatcgctctccttcacaaccagatcaccgcctgt
gactccatactggagcgtatggagggcatgctgagcggcttccagagcgacctgtcctcc
atcagcagtgagatccagactctgcagcagcagtcggtcagcatgaacgtccggctgaag
aacaggcaggcggtacgcagtcacctcagccagctggtggacgagctggtggtccccggg
gccatgatctccaccatcctggacagtccggtgacggagcaggagttcctggagcagctc
cacgagctcaacaacaagatcaacttcgccaaagagctgagcttcagagagacgctggcc
tgctccgacatccaggacatcgtggaccgcctcaagctaaaggcggtgtcaaagatcaga
gagttcattcttcagaagatttactccttcaggaagccgatgacaaactaccagatccct
cagaacactctgctgaagtacaggttcttctatcagttccttctggccaacgagagaacg
gtggccaaggagatcagagacgagtacgtggacaccatgagcaaaatctacttcagctac
ttcaagtcgtacagcggcaggctgctcaaagtgcagtacgaggaggtcgcagacaaagat
gacctgatgggagtagaagacaccgccaagaaaggtttcttctccaaaccgtctctgaag
agcaggaacaccatcttcacggtgggccagaggggctccatcctgagtcctgctgagctg
gaggggcccatcctggttcctcatacggctcagaggggagacagcaggtatccctacgag
acgctgttccgcagccagcactacgctctgctggacaacggctgcagggagttcctcttc
ctgtccgacttcttcatggtgacgggaaactccgccctcgacctcttcaacagcatcatg
ggaaaaactctcagcatgttcctgaagagtatgtccacctacgtgtccgactgctacgac
agcatcgccatcttcctctgcatccacatcatcctccggttcagagccatcaccgccaag
aggaacatcccggctctcgacaagtactgggaggcggtgctggagctgctgtggccgagg
tttgagctcattctggagatgaacatcaacagcatccgaaacacagaccctcagaaactg
ggagtactggacaccagaccacactacatcacccgtcgatacgcagagttctcgtcggcc
atcgtcagcatcaaccagacgtttcccaacgagaggaccaacactctgctgggacagctg
ctggccgaggtggaaaactttgttctgaagatggcggccgagtttccctccagaagagac
cagctcatcttcctcatgaacaactacgacatgatgctcagcgtgctcatggagagggca
gcagacgacagtaaagaggtcgagggcttccagcagctgctcctggccaggacgcaggag
ttcatcgaggagattctgtctccccccttcggagggatgatcgcgttcgtgaaggaggcc
gaggcgttgatggagaaagggcagctggaccgactgaagaacgacgaagctcgtatcact
cagctggttcggggcttttccagctcgtggaaacagtcggtggaggcgatgagtcaggac
gtgatgaggtccttcaccaacttcaaaaatggaaccagcatcatccagggcgccctgacc
cagctgatccagtactaccacggcttccacaagatcctcaaccagcccaccttccgcagc
ctggccgtccgctcggagctcatcaacctgcaccacctcatggtggaggtgaagaagcac
aaacccaacttctaa
DBGET
integrated database retrieval system
