KEGG   Anoplopoma fimbria (sablefish): 129096985
Entry
129096985         CDS       T09102                                 
Symbol
ubap2l
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-associated protein 2-like
  KO
K26545  ubiquitin-associated protein 2
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afb04121]
    129096985 (ubap2l)
   03400 DNA repair and recombination proteins [BR:afb03400]
    129096985 (ubap2l)
Ubiquitin system [BR:afb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    129096985 (ubap2l)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     129096985 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N CUE
Other DBs
NCBI-GeneID: 129096985
NCBI-ProteinID: XP_054461631
LinkDB
Position
10:complement(8080771..8105549)
AA seq 1190 aa
MMTSMGGNRARGSWEQTPGQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLI
DITGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKETSQAEIGE
EGKENREKGGEKDVARRRGGAPRRGRGASRGREFRGQENGLDGAKAGIAGRGAERGRRGR
GRGRGTVGVSGRRGGRFSAQGMGQIDKGPRYDIAGGERTFNPADYAEPSQTEENYGGGST
WNNTGSAELEDGARLEYAAGEGTNYPPKFDSAPGAWRSATEEWGTEDWNEDLSETKIFTA
SSVASVPQPQENVTITKGQRIDLAVLLGKTPPSSSETENPPMEATQPPSLSQSLVFSNSK
QGAPLSQTSSSTPYTQHSMVSMLSKGFGDVGDPKGASTGTTGSQFLEQYKTAQALAQLAA
QHSQTGPPNTTPSSWDTSATSLGQYDMKAQAESAVHAPFTKRQPYQAATSTSSMLDVFLQ
DKGLPPSSSSSTLPQHTTSSPHVVPPPASSLPKMAAAPSLGHQVSPSSSDAHGSSPLPLQ
QHKLKQQKKKTSITTKIPAMAVEMPGSADITGLNLQFGALQFGSEPVLPDYESTPATTTS
ANQVQNSLYTSTNSQMDLYDQRGSQTRRYPPSASSSPQKDMQPKNGFTSMQTTQSVEAAA
GSAVSVKQGSDSVPSVSSMGTMVDSGSASLMSTSNQTSHSGLGHSEDMPPSTHPPPQHNN
SHLSHQNSHAPSSVRTSNSSLLHPSVDGDSSLHSSSFPSSVSAVPSSVPSSSSVAAAQGS
LGAPHASSMGSATVSAPSGLGPVSSLAMGLNTVSMCAPAVAASIASAASAIPSATSSSLR
SSAVSSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRIPLDYYSIP
FATPTTALTGRDGSLTNNPYSGDLSKFGRGDASSPSPATTLAQTQQNQTQTHHTAQQPFL
NPALPPGYSYTSLPYYTGMPGLPNTFQYGPAVFPVAPTSSKQHGVNVGVNASATPFQQAS
GYGSHGYSTGYEDVGQASGSGDFCKGGYGTAVAAAASAQNKPASSVTGPGVGVSVTSSNT
GVPDISGSVYTKTQSFEKQGFHAGTPAASFSLPSALGSGGPIXPPAAAGYAPAPFMHILA
PHQQPHSQILHHHLQQDGQSGTGQRSQNASIQQKSQINKSAYNSYNWGAN
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgatgacgtccatgggcgggaaccgagcccgtggcagctgggagcagacaccgggacag
acacagagtcagacacagcacaagcagaggcctcaggctactgcagagcagatccgactt
gcgcagatgatttcagaccacaatgatgcagactttgaagagaaggtcaaacagctgatt
gacatcacaggcaaggaccaggatgagtctatgatcgcactgcacgattgcaacggggat
gtcaacagagccattaacgtgttgctggagggtagcccagacaccgactcctgggaaatg
gtgggaaagaagaaaggtgtctcaggccagaaggagactagccaggcagagataggagag
gaaggaaaagagaatagggagaaaggaggagagaaagatgtagcacgtcgccgaggtgga
gctccacgcaggggccgcggagccagcaggggacgagagtttcgtggtcaggagaatggc
ttggatggagccaaggctggaatagctggaagaggtgcagagcgaggccgaaggggaaga
ggcagaggaagagggactgttggagtatctggaaggcgaggaggcagattttcggcacag
ggcatgggccagattgataaggggcccagatatgatattgcaggaggtgagagaacattc
aaccctgctgactatgcggagccatcccagacagaagaaaactatggagggggcagcacc
tggaacaacacaggaagcgcagagctcgaggacggagctaggttggaatatgctgcagga
gagggaacaaattacccgcccaagtttgactctgctccgggcgcctggaggtctgccaca
gaggagtggggcactgaggactggaatgaggatctttcagagaccaagatattcaccgct
tccagtgtggcgtccgtccctcagcctcaagagaatgtgaccatcaccaaaggacagagg
attgaccttgcagtgctgcttgggaagactcctccatcctcctcagagaccgaaaacccc
cccatggaggccacccagcccccatctttgtcccagtcactggttttcagcaactccaag
caaggagcgccgctctcccaaacatcgtccagcaccccttacacccagcacagcatggtc
agcatgctgagcaagggctttggggatgtgggggaccctaaaggagcgagcacagggacc
actggttctcaattcctggagcagtataaaacagcccaggcactggcccagctggcagcc
cagcactcccagactggacctcctaacacaaccccttcatcctgggacaccagtgccacc
tcactgggacagtacgatatgaaggctcaggcggagtctgcggtccatgcgccctttacg
aagcggcagccctaccaggccgccacctcaacctcgtccatgttggatgttttcctgcag
gacaaaggcctgcctccttcctcctcgtcttctaccttaccacaacatacaacatcctcg
ccccatgtggtgcccccgcctgcctcctcccttcccaaaatggcagcagctccttcacta
ggtcatcaagtttccccaagttcctcggatgcccatggttcgagtccactgccgttgcag
caacacaaactcaaacagcagaagaagaagacttccattacaacaaagattcctgcaatg
gcggtagagatgcctggctcagcagacatcacaggcctcaatcttcagtttggagcgctg
cagtttgggtcagaaccagttctaccagactacgagtccacccccgccaccacaacatca
gccaaccaggttcagaacagtctctacactagcactaacagtcagatggacctgtacgat
cagagagggtcccagactcggcgctaccctccctcagcctcttcctcccctcagaaggat
atgcagcccaagaatggcttcacttccatgcaaacaacacaatctgtggaagctgcagca
ggctctgcagtatcagtcaagcagggctctgattcagtcccgtctgtctccagcatgggc
actatggtcgacagtggctctgcctccttgatgtctacatccaatcagacgtcccacagt
ggtctggggcacagtgaagacatgcctccaagcacccacccccctcctcaacacaacaac
tctcacctatcgcatcagaacagccatgctccatcttcagtccggacatccaactcaagc
cttctgcatcccagcgtagacggtgactcgagcctgcactcctcctccttcccttcctca
gtgtcagctgtaccgtcatcagtcccctcctcttcgtcggtggctgctgcacaggggtca
ctaggggcccctcatgcgtcgtccatgggctctgccacagtttcagccccctccggcctc
ggccccgtcagcagtctggccatgggccttaacactgtctccatgtgtgccccagctgtc
gctgcctcaatcgcctcagcggcctcggccattccttcagctacttcctcatctttacgc
agttctgcggtatcctcagggaaagcacctccaaacttgccacctggagtgccccctcta
ctgcccaacccatacatcatggcccctggactactgcacgcctaccctccccaggtgtat
ggatatgatgacctacagatgctgcaaacaagaataccgctggattattacagcatcccg
tttgcaactcccacaacggcactgactggcagagacggcagcctgacaaacaacccttac
tctggtgacttatcaaagtttggtcgaggtgatgcatcatccccgtctccagccaccaca
ttagctcagacacaacagaaccagacccagacgcatcacaccgcacagcagcccttcctc
aatcccgcactgccgcctggctacagctacacgagcctcccatactacactggcatgccg
ggcctgcccaataccttccagtacggacctgctgtgtttccggtggctcctacctcgtca
aagcagcacggtgtgaatgtcggcgtcaatgcatcagccacacccttccagcaggctagt
ggctatggttcccatggatacagcactggctatgaggatgtgggccaggcttcagggagt
ggggatttctgtaagggcggatacggcactgccgtggccgctgccgcttctgcacaaaac
aagccagccagctctgtcaccgggcctggagtcggagtctctgtgacatcaagcaacaca
ggggtaccagatatttcagggtctgtttacacaaagacgcagtcctttgagaagcagggt
ttccatgctggcacaccagcagcttcgttcagcctgccctcggctctgggtagcggagga
cccatcnaacccccggcggctgccggctacgccccagcccccttcatgcacatcctggca
ccgcaccaacaaccccactctcagatcctgcaccaccacctgcagcaggacggacagagc
ggcaccggacagcgcagccagaacgcctccattcagcagaagtctcaaatcaacaagtcg
gcatacaacagctacaactggggggcaaactaa

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