KEGG   Anoplopoma fimbria (sablefish): 129097084
Entry
129097084         CDS       T09102                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129097084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129097084
   03016 Transfer RNA biogenesis [BR:afb03016]
    129097084
   03012 Translation factors [BR:afb03012]
    129097084
   04131 Membrane trafficking [BR:afb04131]
    129097084
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129097084
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     129097084
Transfer RNA biogenesis [BR:afb03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    129097084
Translation factors [BR:afb03012]
 Eukaryotic type
  Elongation factors
   129097084
Membrane trafficking [BR:afb04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    129097084
Exosome [BR:afb04147]
 Exosomal proteins
  Proteins found in most exosomes
   129097084
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 129097084
NCBI-ProteinID: XP_054461775
LinkDB
Position
10:12388819..12395941
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLESSEKMSWFKGWKVDRKEGGATGVTLLEALDSILPPSR
PTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPPNLTTEVKSVEMHHESLT
EALPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPMAADNFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVDKKLPSGGKVTKSAQKAEKKK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactctggcaag
tccaccaccaccggtcacctgatctacaagtgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccggcaggtattacgtgaccatcatcgacgccccgggacacagggacttcatcaag
aacatgattaccggcacatctcaggccgactgtgcagtgctgatcgttgctgctggcgtt
ggagagttcgaggccggtatctccaagaacggccagacccgcgagcacgccctgctggcc
tacactctgggcgtgaagcagctcatcgtcggagtcaacaagatggactccaccgagccc
ccttacagccagaagcgctttgaggaaatcaccaaggaagtgagcacctacatcaagaag
atcggctacaacccagccaccgtcgcctttgtccccatctccgggtggcacggagacaac
atgctggagagcagtgagaagatgagctggttcaagggttggaaggtcgatcgcaaggag
ggcggtgccactggggtaaccctgctagaagctctggactccatcctgcccccctcccgc
cccacagacaaggccctgcgcctgcccctgcaggacgtctacaagattggcggtattgga
acagtccccgtcggccgcgttgagaccggcgtcctgaagcccggcatggtcgtcactttt
gctccccccaacttgaccactgaggtaaagtccgtggagatgcaccacgagtctctcacc
gaggctctccctggcgacaacgttggcttcaacatcaagaacgtgtccgtcaaggaaatc
cgccgtggaaacgtggccggtgacagcaagaacgacccaccaatggctgccgacaatttc
accgcccaggtcatcatcctcaaccaccccggccagatctcccagggttacgcccccgtg
ctggactgccacaccgctcacatcgcctgcaagttcagcgaactaaaggagaagattgac
cgtcgttccggcaagaagcttgaggacaaccccaaggctctgaagtccggagacgccgcc
atcatcaccatggtgcctggaaaacccatgtgtgttgagagcttctcccagtatccccca
ctgggtcgcttcgccgtgcgtgacatgaggcaaaccgtggctgttggcgtcatcaagtct
gtcgacaagaagcttccctctggcggcaaggtcaccaagtccgcgcagaaggccgaaaag
aagaaatga

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