KEGG   Anoplopoma fimbria (sablefish): 129097085
Entry
129097085         CDS       T09102                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129097085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129097085
   03016 Transfer RNA biogenesis [BR:afb03016]
    129097085
   03012 Translation factors [BR:afb03012]
    129097085
   04131 Membrane trafficking [BR:afb04131]
    129097085
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129097085
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     129097085
Transfer RNA biogenesis [BR:afb03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    129097085
Translation factors [BR:afb03012]
 Eukaryotic type
  Elongation factors
   129097085
Membrane trafficking [BR:afb04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    129097085
Exosome [BR:afb04147]
 Exosomal proteins
  Proteins found in most exosomes
   129097085
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 129097085
NCBI-ProteinID: XP_054461777
LinkDB
Position
10:12384967..12388599
AA seq 461 aa
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLESSEKMAWFKGWKVERKEGNANGTTLLEALDAICPPAR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPTMVVTFAPCNLTTEVKSVEMHHESLT
EAMPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPKGADHFNAQVIILNHPGQINAGYAPV
LDCHTAHIACKFSELIEKIDRRSGKKLEDAPKFVKSGDAAIVKLVPQKPMVVEPFSNYPP
LGRFAVRDMRQTVAVGVIKSVTYKDTSGKTTKAAEKAQKKK
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccacctcaaccggtcacctgatctacaagtgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccggcaggtattacgtgaccatcattgatgcccccggacacagggacttcatcaag
aacatgatcactggtacctctcaggctgactgtgcagtgctgatcgttgctgccggcgtt
ggtgagttcgaggctggtatctccaagaacggccagacccgcgagcacgccctgctggcc
ttcaccctcggcgtgaagcagctcatcgtcggagtcaacaagatggactccaccgagccc
ccttacagccaagcccgtttcgaggaaatcaccaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccacagtcgcctttgtccccatctccgggtggcacggagacaac
atgctggaaagcagtgagaagatggcctggttcaagggatggaaggtcgagcgcaaggag
ggcaatgccaatggaaccacactgctggaggctctggatgccatctgccccccagctcgc
cccacagacaagcccctgcgtcttcccctgcaggatgtctacaaaatcggaggtattgga
actgtacctgtcggccgtgttgagactggtctcctgaagcccaccatggttgtcaccttt
gctccctgcaacttgaccactgaggtgaagtccgtggagatgcaccacgagtctctgacc
gaagctatgcccggtgacaacgtcggcttcaacatcaagaacgtgtccgtcaaggaaatc
cgtcgtggatacgtggctggagacagcaagaacgacccacccaagggagctgatcatttc
aacgcccaggtcatcatcctgaaccaccctggccagatcaacgcaggttacgcccctgtg
ctggattgccacaccgctcacatcgcatgcaagttcagtgaactcatcgagaagatcgac
cgtcgttccggcaagaagcttgaggacgcacccaagtttgtcaagtctggagacgcagcc
atcgtcaaactggtcccacagaagcccatggttgtggagcccttctccaactatcctccc
ctcggtcgtttcgccgtgcgtgacatgaggcagacagttgccgtcggtgtcatcaagtct
gtcacatacaaggacacatctggaaagacaaccaaggctgcagagaaggcccagaagaag
aaatga

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