KEGG   Anoplopoma fimbria (sablefish): 129097086
Entry
129097086         CDS       T09102                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129097086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129097086
   03016 Transfer RNA biogenesis [BR:afb03016]
    129097086
   03012 Translation factors [BR:afb03012]
    129097086
   04131 Membrane trafficking [BR:afb04131]
    129097086
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129097086
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     129097086
Transfer RNA biogenesis [BR:afb03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    129097086
Translation factors [BR:afb03012]
 Eukaryotic type
  Elongation factors
   129097086
Membrane trafficking [BR:afb04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    129097086
Exosome [BR:afb04147]
 Exosomal proteins
  Proteins found in most exosomes
   129097086
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 FcpA Gtr1_RagA
Other DBs
NCBI-GeneID: 129097086
NCBI-ProteinID: XP_054461778
LinkDB
Position
10
AA seq 462 aa
MGKVKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETVRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLESSEKMTWFKGWKVERKESNANGTTLLEALDAICPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVMKPGMVITFAPCNLTTEVKSVEMHHEALT
EAAPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPLAADTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFTEIKEKVDRRSGKTIEDNPKFVKSGDAAIITLTPQKPMVVEPFAIYPP
LGRFAVRDMRQTVAVGVIKSVDKKLPGSGKVTKAALKADKKK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggtaaagctccacatcaacatcgtggtcattggccatgtcgactctggcaag
tccaccaccaccggtcacctgatctacaagtgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccgtcaggtattacgtgaccatcatcgacgccccgggacacagggacttcatcaag
aacatgatcactggtacctctcaggccgactgtgcagtgctgatcgttgctgccggcgtt
ggagagtttgaggccggtatctccaagaacggccagacccgcgagcacgccctgctggcc
ttcaccctcggcgtgaagcagctcatcgtcggagtcaacaagatggactccaccgagccc
ccttacagccagaagcgctttgaggaaatcaccaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccaccgtcgcctttgtccctatctccgggtggcacggagacaac
atgctggaaagcagtgagaagatgacctggttcaagggatggaaggtcgagcgcaaggag
agcaatgccaatggaaccacactgctggaggctctggatgccatctgccccccaactcgc
cccacagacaagcccctccgtttgccgctgcaggacgtctacaagattggaggtatcgga
acagtcccagttggccgcgttgagaccggcgtcatgaagcccggcatggtcatcaccttt
gctccctgcaacttgaccactgaggtgaagtccgtggagatgcaccacgaggctctgacc
gaagccgcccccggcgacaacgtcggcttcaacgtcaagaacgtgtccgtcaaggagatc
cgccgcggaaacgtggccggcgacagcaagaacgacccaccattggctgccgataccttc
actgcccaggttatcatcctgaaccaccccggccagatctcccagggttacgcccctgtg
ctggattgccacaccgctcacatcgcttgcaaattcaccgagatcaaggagaaggttgac
cgtcgttccggcaagacgattgaggacaaccccaagtttgtcaagtctggagatgcagcc
atcataactcttaccccacagaagcccatggttgtggagcccttcgccatctaccctccc
ctcggtcgctttgctgtgcgtgacatgaggcagactgtggctgtcggtgtcataaagtca
gtagataagaagcttcccggcagtggaaaagtcaccaaggctgcattaaaggcagataag
aagaaatga

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