Anoplopoma fimbria (sablefish): 129097137
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Entry
129097137 CDS
T09102
Name
(RefSeq) lamin-A-like
KO
K12641
lamin A/C
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04210
Apoptosis
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129097137
09142 Cell motility
04820 Cytoskeleton in muscle cells
129097137
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129097137
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
129097137
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GFIT
Motif
Pfam:
Filament
LTD
Nuf2_DHR10-like
TPR_MLP1_2
DUF5996
Motif
Other DBs
NCBI-GeneID:
129097137
NCBI-ProteinID:
XP_054461851
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Position
10:11683086..11689477
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AA seq
645 aa
AA seq
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MATPKNTPRGANSPLSPNRITRLQEKEDLCNLNDRLAVYIDKVRFLETENAGLRLRITES
ESEVSRELSGLKAAYETELADARQTLDSVAKERARLQLELGKVREDYKELKARNTKKESD
LIAALQRLKDLEALLNSKDASLTTALGEKRGLEVENRDLKAQVAKLDTSLADAKKQLQDE
MLRRVDGENRIQTLKEELEFSRNLQSEELRETKRRHESRMVELDNGHMQDFESKLAEALT
DMRSQHEMQIQLYKNEIEKTYNSKLENARQSADRSSHLVGAAHEELQQTRIRVESMSSQI
SQLQKQLAAREAKLRDLEDALSRERDSTRRLLGEKDREMAEMRQQMQQQLDEYQELLDVK
LALDMEICAYRKLLEGEEQRLRLSPSPPPAKMTGSRSSTSGAHSRSVHYSAQNSPAKRRR
PNDTDSEASSIAGGAVARTRIAQQASASGRVTVDEVDLEGKYVRLSNKSDEDQNLGNWQV
KRQVGSGAPIIFKFPVKFTLKAGQRVTIWASGAGGTHNPPSDLVWKTQPSWGTGDLFQTT
LISANGEEMAMRKVTRTHLEEEDDDMQVAHSTCGDSEYNLRSRTVVCGSCGLPSDKSGSN
CSMSLASRSFRSGGGISEGLLPHSYVFSASTPRKTGTRMETCPIM
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacccaaaaacactccccgaggtgccaactcaccgctgtcccccaaccgtatc
acccggctccaggagaaggaggacctgtgcaacctcaacgaccggctggccgtctacatc
gacaaggtgcgctttctggagacggagaatgcaggcctgcgactgcgcatcacagagtcg
gagtccgaggtcagccgggaactgtcgggcctgaaggccgcctacgagaccgagctggcc
gacgcccgccagaccctggactctgtggccaaagagcgagcgaggctgcagctggagctg
ggcaaggtgcgagaagactacaaggagctgaaggcgaggaacaccaaaaaggagtctgat
ttgatcgcagcgttgcagaggctcaaagacttggaggctctgctgaactctaaagatgcg
tccttgactacggctctgggagagaagcgtggcctcgaggtggaaaacagggacctgaag
gcgcaggttgccaagttggacaccagtttggccgatgccaagaagcagctgcaagatgag
atgctgaggagggtggacggagagaatcgcatccagaccctcaaagaggagctggagttt
tccaggaacctccagtctgaggaactgcgggagacaaagcggcgtcatgagtctcgcatg
gttgagttggacaatggccacatgcaggattttgaaagcaagctggccgaggcactgaca
gacatgcgcagccagcatgaaatgcaaatccaattgtacaaaaatgagattgagaagacc
tacaattccaagctggaaaatgctcgtcagtcagcggacaggagcagccacctggttggg
gcagcacacgaggagctccagcagacccggatacgcgtggaatccatgtccagtcagatc
agccagctgcagaaacagctggcggctcgtgaggcgaagctaagggacctggaagacgcc
ctgtctcgggagcgggactccacccgccgcctgctgggggagaaagacagagagatggcc
gagatgaggcagcaaatgcaacagcagctggacgagtaccaggagctcctggacgtcaag
ctggctctggatatggagatatgtgcttacaggaagttgctggagggagaggagcagagg
ctgcgtctctcccccagccccccacctgccaaaatgacaggaagtcgttcctctacttca
ggagctcactctcgctcggtccactacagcgctcagaactctcctgcaaagaggcgtcgc
cccaacgacaccgacagcgaggcctcgagcatcgcaggcggagccgtggcccgcactcgc
atcgcccagcaggcctcggccagcgggcgggtcactgtggatgaggtggacctggaaggg
aaatatgtccgtctcagcaacaaatcagatgaggatcagaatttggggaactggcaggtg
aagaggcaggtggggtccggtgctccgatcatcttcaagttcccggtaaaattcaccctg
aaggccggccagagggtcacgatctgggcctctggtgctggtggaacccacaatcctccc
tctgacctggtgtggaagactcagccctcctggggcaccggagacctgttccagaccact
ctgatcagcgccaacggagaggaaatggcaatgaggaaggtcacccgcacacacttggaa
gaggaggatgatgacatgcaggtggctcacagcacctgtggagacagcgagtacaacctg
cggagccggacggtggtctgcggctcctgcggactcccttcagataaatccggcagcaac
tgctccatgagcttggcctcccgctccttccgcagcggtggaggaatttccgagggtcta
ctgccgcactcctacgtgttcagcgccagcacccctcgcaagactggaaccagaatggag
acctgtccaatcatgtga
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