KEGG   Anoplopoma fimbria (sablefish): 129097145
Entry
129097145         CDS       T09102                                 
Symbol
rnf5
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129097145 (rnf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afb04121]
    129097145 (rnf5)
Enzymes [BR:afb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129097145 (rnf5)
Ubiquitin system [BR:afb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129097145 (rnf5)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-ANAPC11 RING_XB3-XBAT31 zf-rbx1 Prok-RING_4 zf-C3HC4_4 Baculo_IE-1 PTR3_N zf-UDP Rtf2 IBR_1 zf-RING_6 zf-RING_4 zf-RING_16
Other DBs
NCBI-GeneID: 129097145
NCBI-ProteinID: XP_054461861
LinkDB
Position
10:complement(9637183..9646006)
AA seq 212 aa
MAAADPRSSSDGGPANRGGFPAGESSNDRDGPGGSSSGGGEGEPERDRATFECNICLDTA
RDAVISMCGHLFCWPCLHQWLETRPSRQQCPVCKAGISREKVIPLYGRGSSSQEDPRLKT
PPRPPGQRTEPEGRGGMFQGFGDTGFHMSFGIGAFPFGFFTTVFNANDPFHRTDQYAGDH
QGNSNLNNGNNNWQDSLFLFVAIFFFFWLLSV
NT seq 639 nt   +upstreamnt  +downstreamnt
atggcggccgcggatccccggtcctcgagtgacggcgggccggccaacagaggaggattc
ccggccggggagagcagcaacgaccgcgacgggccgggcggcagcagcagcggcggcggg
gagggcgaaccggagcgggaccgagccaccttcgagtgcaacatttgtttggacactgcc
agggacgctgtcatcagtatgtgcggccacttgttctgctggccctgtcttcatcaatgg
ttggagacgcgacccagcaggcagcagtgtcctgtatgtaaagcgggcatcagcagggag
aaagtcatcccactgtacggcagagggagctccagccaagaggaccccaggttgaaaact
ccacctcggcctccgggacagagaacagagccagaggggcgaggcgggatgtttcagggt
ttcggggacactggctttcacatgtctttcggcatcggcgcattccccttcggcttcttc
accacagtcttcaacgccaacgacccctttcacagaacagaccagtatgcaggtgaccac
caaggcaacagtaacctcaacaacggcaataacaactggcaagactccctcttcctgttc
gtggccatctttttcttcttctggctcctgagtgtgtga

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