Anoplopoma fimbria (sablefish): 129097152
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Entry
129097152 CDS
T09102
Symbol
sox4a
Name
(RefSeq) transcription factor SOX-4a
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129097152 (sox4a)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129097152 (sox4a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129097152
NCBI-ProteinID:
XP_054461871
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Position
10:complement(20412321..20414834)
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AA seq
380 aa
AA seq
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MVQHMSQTDTAHAHSPGGDSSTDTGDMDLEMDVSPTPESPSSSPGVRSDLAWCKTPTGHI
KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDVDKIPFIREAERLRLKH
MADYPDYKYRPRKKVKSGSAPSKQAEKSAEKSGERSSKAGVKRSPASRGGSRTHKQGAAK
DCASPGDHQALFKSRSVSGARQIPEKRSGEARRGHVFCGAGSLESGPPSVGVPASPTLSS
SAEFSDPLSLYEEQSPAATSESSSSSHTARLRYARASSPTPSASHSSSSVSSSSSSSSSS
SDEEFEDERLEPTPSPGFESMSLGGMGFSDAELDRDLDWSFGECGAGSHFDFPDYCTPEV
SEMISGDWLESTISNLVFTY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacatgagccagacagacaccgcccacgctcactctcccggcggggactcc
tccaccgacacgggggacatggacctggagatggacgtgtctccgacccccgagtccccg
tcctcctccccgggggtccggagcgacttggcgtggtgcaaaactccgactgggcacatc
aagagacccatgaacgccttcatggtgtggtcgcagatcgagaggaggaagatcatggag
cagtctccggacatgcacaacgcggagatctccaagcggctggggaagaggtggaagctg
ctgaaggacgtggataagatcccgttcatcagggaggcggagcggctcagactcaaacac
atggccgactacccagactacaagtaccgacccaggaagaaggtgaagtccgggagcgca
ccgagcaagcaggcggagaagagcgcggagaagagcggagagcggagctccaaagccggc
gtgaagaggagcccggcgtccagaggaggcagcaggacgcacaaacaaggagccgccaag
gactgcgcgtctcccggggaccaccaggcgctcttcaagtccaggtccgtgtctggagcc
aggcagatcccggagaagcgcagcggagaggcgcggcgcggacacgtgttctgcggggcc
gggagcctggagagcgggcctccgtccgtgggggtccccgccagccccaccctcagcagc
tcggccgagttcagcgaccctctcagcctgtacgaggagcagagcccggcggccaccagc
gagtcctcctcctcctctcacaccgcgcgtctcaggtacgcaagagcctcctccccaaca
ccgtcggcctctcactcctcctcatcggtgtcttcttcttcatcatcctcctcctcctca
tctgatgaagagtttgaagacgagcggctcgaacccactccgagccccgggtttgagagc
atgtccctgggtgggatgggcttctccgacgcggagctggaccgggacttggactggagc
ttcggggagtgcggggctggatctcacttcgacttccccgattactgcaccccggaggtc
agcgagatgatctcaggagactggctggagtccaccatctccaacctggtgttcacctac
tga
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