Anoplopoma fimbria (sablefish): 129097164
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Entry
129097164 CDS
T09102
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129097164 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129097164 (pex1)
Membrane trafficking [BR:
afb04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
129097164 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
AAA_18
RNA_helicase
NPHP3_N
ABC_tran
AAA_28
NACHT
AAA_33
DUF815
TIP49
AAA_5
Sigma54_activ_2
AAA_29
ATP-synt_ab
Viral_helicase1
TsaE
RuvB_N
ATPase
AAA_2
AAA_25
AAA_7
nSTAND_NTPase5
Mg_chelatase
IstB_IS21
APS_kinase
FtsK_SpoIIIE
ORC-CDC6-like
AAA_23
CLP1_P
Parvo_NS1
AAA_3
Motif
Other DBs
NCBI-GeneID:
129097164
NCBI-ProteinID:
XP_054461890
LinkDB
All DBs
Position
10:complement(3932758..3943455)
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AA seq
1249 aa
AA seq
DB search
MFSNQGIQPVTVVFNNNKNCFLHLSSKLISHLSLNENQALELSWGHGSPVFLSWTQNRTS
CSLDSHKVELCRQLGEKLGLSDGEQGFLRPCHQVSSVHQVFVEPLSSDDWEILELHSAAL
EQQLLDQIRVVFQDAVFPVWVDSHTVIYIQIASLSPSVPYGRLEQFTELVVSPKSHAGIG
HLNGSPVTNSKEEHFHRQENMDHSNPSGPSLESTPPQIHQWGGIADMKSLLRYMIKGTYD
PVKELPPVPDVPVLFTDSIYRVCGAPPDSLCTISHIATAAIHLFPWRQGLDAGTPAGQSP
VTYGLLSKVLSPKESRDRAKQAMEKKKNAGVTKVAGGDEVKEEEATVVRVVYHDSEKLVR
KNRSPIEGEIHSGRVWIPKPLAFKMNINPHTTVRIKPVKSTIKVASSIRLKPLIPLLEED
DEEIQTAFLGWLHTQSHEPLACLTARSGTILLHGTDAKLEFVLTVLKPEPERDPPDQLFS
LASAVIQKENIQVDREPVTLPTVNSTTKTTNPELPSLSILGGIDELSRTGFDFISHSLLG
SPLARELGTTGRGLQGGALLITGAKGSGKSTLSRALCRKAREDVDAHVELVDCKKLQGKR
AETVRQMLQDIFEQAEWRQPSVVLLDDLDHMTGAPNSPEHEHGAEALMQQYIAQSLKDVV
DEVLVHSSLVCLIITSQSEHSLHPSLTEMQGSHFIQGFAHIQPPDQDQRAEILHRLILRK
NSISGETLQTLDLAAVAKETEGYMPQDLSLLLERAVHANTVQGGHSDQGVCLSSGDFVQA
LKGFTPPSLWGVDLHTPSGVGMERVGGLREVRQQLMDTILLPAKYPILFSNLPIRHRSGI
LLYGAPGTGKTLLARAVAKDSGMNFISIKGPELLSKYIGASEQGVRDVFQRAQAAKPCIL
FFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLHGVYVLAATSRPDLIDPALLRPG
RLDKSLYCPPPDLEARVEILKALSAGIALAADVDLDQLAAATEQFTGADLKALLYNAQLE
AVHNSMGSNTPHELNSGSDSDMSLSSMIFPNNSSGSDDSVGEGDPGVGLDQSMILLEPSE
LQAEDRQHCGNVWRLYFGSSYESDLENSPISGRNSRCVSGPNSMTHDLTRASGREPGRSL
TPAYMSSLQSGYKELGLEQLERLQQDINNIKNNYRRDNGACVRVHSVSSQPGLLLCQAHV
NSALAVTRPSLSKADCNRYTKLYEVFDSAGNGKSLHSATFKPGQRVTLA
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaatcagggcattcaacccgtaactgttgtttttaacaacaacaaaaactgc
tttctccatctctcctccaagttgatctcgcatctttccctgaacgagaaccaggctttg
gagttgtcctggggccatggatctccagtgttcctcagctggactcaaaacagaacctcc
tgcagcctggacagccataaagtggagctgtgtcgacaactgggagaaaagcttggcctg
agcgatggagagcagggcttcttgagaccatgtcaccaagtctcatcagtacatcaagtg
tttgtggagccactgtcatctgatgactgggaaatcttggagctccacagtgctgcactg
gagcagcagctattggatcagatcagagttgtttttcaagatgccgtgtttcctgtgtgg
gtggacagccacactgtcatctacatccaaatagcatcgctttcgccatctgtgccttat
ggtcgcttggagcagttcacagaactggttgtctctcctaagagccacgctggaattggc
cacctcaatggttctccagtgacaaacagcaaggaagagcattttcacagacaggaaaat
atggatcattccaacccctcagggccgtcattagaaagcacccctcctcaaatccaccag
tgggggggcatagctgacatgaagagcctgctacgctatatgataaaaggtacttacgac
ccagttaaagagctgccacctgtacctgacgtccctgtcctcttcactgactctatctac
agagtgtgcggtgcacctccagactcactttgcactataagccatattgcaactgctgct
attcatttatttccttggaggcaggggttggatgctggaacacctgcaggtcagtcaccg
gtgacttatggcctgctctccaaagttctctctcctaaagagtcaagggacagagccaag
caggctatggaaaaaaagaagaatgcaggagttactaaagttgctggaggagatgaggtg
aaagaagaggaagccacggtggtcagggtggtgtaccatgatagtgagaagctagtacgc
aagaatagaagtcccatcgagggagagatccatagtggaagagtatggatcccgaagccc
ctggccttcaaaatgaatatcaacccacacacaacagttagaattaagccggtcaaatcc
actatcaaagtagcctcctctattcgtctaaagcctctcataccgctgctcgaggaggac
gacgaagagatccagacagctttcctcggttggctacacacccagagtcatgaaccttta
gcctgtctgacagcacggtctggcaccatcctcctacatggaactgatgcaaagttagag
tttgtcctaactgtactgaaaccggaaccagagagggaccctccagaccagctgttttca
ctagcctcagctgttatccagaaggaaaacatacaggttgacagagagccagtgacattg
ccaactgtgaattctacaactaaaacgaccaacccagagcttccctccctcagtattcta
ggtgggatcgatgagcttagtaggactggatttgacttcatctcccacagccttctgggt
agtcccctcgcaagagagcttggtacaactggacggggactccagggaggagctttactc
atcactggtgctaagggaagtggaaagagcactctatcccgagcactttgtagaaaagct
agagaagatgtggatgcacatgttgagctggtggactgcaaaaaactacaaggcaaaagg
gcagaaacagtgagacagatgttgcaggatatttttgaacaggctgagtggaggcagcca
tcagtggttttacttgatgacctggaccatatgactggggcaccaaactcgccagagcat
gagcatggcgctgaggcgctgatgcaacagtacattgcacagagcctgaaggatgttgtg
gatgaggtgctggttcattccagtctggtgtgtctgatcatcaccagccagagtgagcat
tccctccacccctccctgaccgagatgcaggggtcccacttcatccagggctttgcacac
atccagccaccagaccaggatcaaagagctgaaatcctgcaccgcctgatactcagaaaa
aacagcatatctggtgagaccttacagactctagacctggcagctgttgccaaggagaca
gagggatacatgccccaagacctttcactgctgttggagcgggctgtccatgccaacact
gtacaaggaggacacagtgaccagggtgtgtgtctgtcctcgggggactttgtgcaggct
ctcaagggattcacgcctccctcgctgtggggtgtagacctccacaccccaagtggagtc
gggatggagagggtaggggggctgagagaagtgcgacagcaactaatggacaccatactg
ctccccgctaagtatccaatcctgttctccaatcttcctatccgccatcgctcaggaata
ttgctgtatggagctcctggtacagggaagaccctgctggccagggccgtggccaaagac
agtggcatgaacttcatcagcatcaagggacctgaacttctgagtaagtacattggagct
agtgagcagggagtccgtgatgtcttccagagggcgcaagctgccaagccatgcattctg
ttcttcgatgagtttgactctctggctcccaggaggggccatgacagcacaggtgtaacc
gaccgtgtggttaaccagctcctcacccagctggatggggtggagggactgcatggtgta
tatgtgcttgcagccaccagccgtccagatctgattgacccggccctgctgagacctgga
cgactggacaagtccctatactgccccccgcctgacctggaagcccgtgtagagatcctg
aaggctctgagcgccggcattgccctggccgctgacgtggaccttgatcagctggcagca
gcaacagagcagttcactggggcagacctgaaggccctgctctacaacgcacagctggaa
gccgtccataacagcatgggctccaacacaccacatgagctgaactccggctccgacagc
gacatgagcctgtcctccatgatcttcccaaacaacagcagtggctcagatgattctgtt
ggggagggggacccaggcgtggggctggaccagtccatgattctcctggagcccagtgag
cttcaagcagaagaccgacaacattgtggtaacgtttggagactttactttggaagctcc
tacgagtcagatctggagaattcaccgatttcaggacggaactctcgctgcgtctccgga
ccgaactccatgacccatgacttaacaagggcatcaggtcgggaacctggacgctcactc
acccctgcctacatgtcctccctccaaagcgggtacaaagagctcggccttgagcagctg
gagcgcctacaacaagacattaacaacatcaagaataactacaggagagacaacggggcc
tgtgtccgggtgcattcagtctccagccagccaggcctgctgctgtgtcaggctcatgtg
aactctgccttggctgtgaccagaccgtctctcagcaaagccgactgcaacagatacaca
aaactgtatgaagtctttgacagtgcagggaatggaaaatctcttcactcagccacattt
aaacctggacaacgtgtgactttagcttga
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integrated database retrieval system
