Anoplopoma fimbria (sablefish): 129097214
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Entry
129097214 CDS
T09102
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129097214 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129097214 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129097214 (vps28)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
129097214 (vps28)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129097214 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
129097214 (vps28)
Exosomal proteins of colorectal cancer cells
129097214 (vps28)
Exosomal proteins of bladder cancer cells
129097214 (vps28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
DGT4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
129097214
NCBI-ProteinID:
XP_054461960
LinkDB
All DBs
Position
10
Genome browser
AA seq
223 aa
AA seq
DB search
MFHGIPVTGGVGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTASCSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgggataccagttacaggaggtgtgggaggagctccggccaataagcccgaa
ttatatgaggaggtgaaattatacaagaatgcaagagaacgagagaagtatgacaacatg
gcagagttgtttgctgttgtcaagacccttcaggccctggagaaggcttacatcaaagac
tgcgtcacaccgaatgagtacactgcttcctgttccaggctgttggttcagtataaggct
gctttcaaacaggtgcagggctccgatgtgggctccatcgacgatttctgcaggaaatac
agactcgactgcccactagccatggaaaggattaaggaggatcggccaatcaccatcaaa
gatgacaaagggaacctgaaccgctgcattgcggatatagtttctctcttcatcactgtg
atggacaagctgagactggagatcagagccatggatgagatccagccagacctgagggaa
ttgatggaaaccatgaacagaatgagcaacatgcctccagactcagaggctaaagacaaa
gtcagcctctggttgacaaccctcagcagcatgtcggcctcagacgagttggatgataac
caggtgcgccagatgctgtttgatcttgagtcggcctacaatgccttcaaccgcttcctc
cactcctcctga
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