Anoplopoma fimbria (sablefish): 129097235
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Entry
129097235 CDS
T09102
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta
KO
K08362
thyroid hormone receptor beta
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129097235 (thrb)
04081 Hormone signaling
129097235 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129097235 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129097235 (thrb)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129097235 (thrb)
Nuclear receptors [BR:
afb03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
129097235 (thrb)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ntox3
CpXC
Motif
Other DBs
NCBI-GeneID:
129097235
NCBI-ProteinID:
XP_054461994
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Position
10:complement(17864635..17949145)
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AA seq
395 aa
AA seq
DB search
MSEPAENCSPGWKDEAIQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIVVGMATDLVLDDSKRLAKRKLIEEN
RERRRKEELQKTVLDRQEPTQEEWDLIRMVTEAHMSTNAQGNHWKQKRKFLSAAGVKETK
PEDIGQASMVNTPEGNKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLK
GCCMEIMSLRAAVRYDSESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLD
DSEVALLQAVILLSSDRPGLSNVEQIERCQEEFLLAFEHYINYRKHKVAHFWPKLLMKVT
DLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaattgctcccccggctggaaagatgaggccattcaaaatggg
tacattccaagctacctagacaaggatgagctatgtgtagtgtgcggggacaaagccacg
ggctatcactatcgctgcattacctgtgaaggttgcaagggtttcttcaggcggacaatc
cagaagaatctcaacccgacctacgcttgtaagtacgaggggaaatgtgtcatcgacaaa
gtgaccagaaaccagtgccaggaatgtcgcttcaagaagtgcatcgtggtgggaatggcg
accgacttggtgttggacgacagcaagaggctagccaagcggaaactaatcgaggagaac
cgggagcgtcgtcggaaggaggagctccagaagacggtgttggaccgacaggagcccacg
caggaggagtgggacctcatccgcatggtgacggaggcccatatgtccacgaacgcgcag
ggaaaccactggaagcagaaacggaaattcctgagtgcagcgggggtgaaggaaactaag
cccgaggatattggtcaagcatccatggtcaatacgcctgaaggaaacaaagtggatata
gaagccttcagtcagtttacaaaaattatcacccctgccataacccgagtggtggacttt
gccaaaaaactgccaatgttttgtgagctgccttgtgaagaccagatcatcctgttgaaa
ggctgctgcatggagatcatgtcactgcgagctgccgttcgctatgattcggagagcgag
accctcacgctcaacggcgagatggcagtcacgcgaggtcagcttaagaacggaggattg
ggcgtagtgtctgatgccatctttgaccttggcgtgtcgctctcctccttcaacttggat
gattcggaggtggctctcctacaggcggtcatcctgctttcatctgatcggccaggcctg
agtaacgtggagcaaatcgaacgctgccaggaggagttcctgctggcctttgaacattac
atcaactaccgcaaacacaaagtggcacatttctggcccaagctgctaatgaaggtgacg
gacctgaggatgatcggcgcctgccacgccagccgattccttcacatgaaagtggagtgt
cccaccgagctattccctcctctcttcctggaggtcttcgaggactga
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