Anoplopoma fimbria (sablefish): 129097256
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Entry
129097256 CDS
T09102
Symbol
sdc3
Name
(RefSeq) putative uncharacterized protein DDB_G0271982
KO
K16337
syndecan 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecule (CAM) interaction
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129097256 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129097256 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
afb00535
]
129097256 (sdc3)
Proteoglycans [BR:
afb00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
129097256 (sdc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
129097256
NCBI-ProteinID:
XP_054462028
LinkDB
All DBs
Position
10:complement(4061069..4095638)
Genome browser
AA seq
487 aa
AA seq
DB search
MKLPCLLALTVLLAHTATGQNWSPSIDDEGSTRDEFYDDEDLYSGSGSGFPGISMRPTSA
GVSFTTEEPLLLSTTQATGPAPSASPAAEPSPIPEDPIATPMPTEADGESGVFWEREKEL
EKEREREQERERERELEKERERELEGERERELERERERERELEREREKEQERQRELERDR
EREKQLERERERERERERVRELEREKEKEREREREREREREREKERERQRERELEREREL
ERIRAAAQTTAAPRSPAAVPVVTTNPATSPAESASPSYDPDVSTTEEEQDVYLSPEPSAF
FPGFNMETTTEEDVSTTAETTTAAPATTAAAATTVKTRFPFRPRVPMTTATQAVPTERTS
RPQQPTTTQDGNNEAGVAGPSGDFEIRDDRRNDLGRGIMPVDPDLIGNTVDAGSSAAQLP
QKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPD
KQEEFYA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttgtctgctcgcgctcacggtgctgctcgctcacaccgccacgggacag
aactggtcgccgtctatcgatgacgaaggctcgacgagagacgagttctacgacgatgag
gacctctactcgggctccggctctggctttcctgggatcagtatgaggccgacatcggcg
ggtgtgtccttcactacagaagagcccctcctcctctccaccacgcaggctacaggcccc
gccccttccgcctcacccgcagctgagccgagccccatcccagaggaccccatcgccacc
ccgatgcccaccgaggccgacggagagagtggtgtattctgggaaagagagaaggagctg
gagaaggagagagagagagagcaggagagggagagagagagagagttggagaaggagaga
gagagagagttggagggggagagagagagagagctggagagggagagagagagagagaga
gagctggagagggagagagagaaagagcaagagaggcagagggagctggagagggataga
gagagggagaaacagttggagagggagagagagagggaaagagagagggagcgggtcaga
gagttggagagagagaaggagaaggagagagagcgagagcgggagagggaacgtgagaga
gagcgagagaaggagagagagaggcagagggagcgtgagcttgaaagagagagagagctg
gaacgaatcagggccgccgcccagaccaccgccgccccaagatcccctgcagccgtaccc
gtggtgaccaccaacccggcaaccagccctgcagaaagtgcatcgccctcttacgacccc
gacgtgagcaccacagaagaagaacaggacgtctacctgtcacctgaaccctcagccttt
ttcccaggctttaacatggagaccaccacagaagaagacgtgtccaccacagcagagacc
acgacagctgcacccgccaccaccgccgccgccgccaccactgtcaagaccaggttcccc
ttcaggcccagggttcccatgacgacagccactcaggcggtgccaacggagagaacgagc
cgtccgcagcagcccacaaccacacaggacggtaacaacgaggcgggtgttgcaggaccg
agtggagatttcgagatccgcgatgatcgtcgtaacgatcttggtcgaggtataatgcca
gtggatcctgatctgatcggcaacacggtggacgcaggaagctccgccgcccagctgcca
cagaagaacatcctggagagaaaggaggtcttgatagccgtgatagtgggaggagtagtg
ggcgccttgtttgcggccttcctagtgatgctgctggtgtacaggatgaagaagaaggac
gagggaagctacacgctggaggaacccaaacaggccaccgtcacctaccagaaaccagac
aagcaggaggagttctatgcataa
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