Anoplopoma fimbria (sablefish): 129097276
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Entry
129097276 CDS
T09102
Symbol
snx13
Name
(RefSeq) sorting nexin-13
KO
K17925
sorting nexin-13
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129097276 (snx13)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
129097276 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
NCH1
Motif
Other DBs
NCBI-GeneID:
129097276
NCBI-ProteinID:
XP_054462054
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All DBs
Position
10:complement(3005916..3029977)
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AA seq
954 aa
AA seq
DB search
MLAEASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIGGGFAVTLLYGKINSEKHLE
KCEQSYLPPTQIGILKTLDEMKLELKPIKIDRRLTGSSFIDEPLQQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLA
EREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDLCELLLYLLLPPGD
FHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDNP
TELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLHSGKEVDAL
KLAANFGKLCVIPLDHILIHNIALQFFMDFMQAAGAQAELFFWLTVEGYRVTAQQQLEVM
QGLQADGKKQPSATKGLLKAAALGVYEQYLSDKASPRVQVDEASVTTLGEKLQKDDPTPE
IFDEIQRNVYEMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSDDGDVESFNGSPT
GSINLSLDDLSNSCHDESMHLHAFISDTGVCNDHGKTYALYAITVFRRSHDGSEDCWKTY
RRYSDFHDFHMRITEQFENLVSILKLPGKKTFNNMDREFLEKRKKDLNAYLQLLLNSEMV
KACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLKSSMRNVSNVVKALPDSLAEGMT
KVSDNMGRMSERLGQDIKQSILKVPPLLPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLL
MDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVEHVDYMTSPEQVADYVKKFRD
SYWPNGILAETPPRRDKSIRMRTRIAAKTSLLGIMPDELKHIIGADTTRKGILRVFDMFQ
YQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIHRYGQKHKSSSLKR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagaggccagtctgtccatctggggatgggggggtcttggagtcgtgctgttc
ctcgtcacctttggaccctttgccatattctacctggccttttatatcttctgcttcatt
ggagggggctttgcggtcactctgctctatggaaaaatcaactcagagaaacacctggaa
aagtgcgagcagtcctacttgccacccacacaaattggtatactgaagacattggatgaa
atgaagctggagctgaagcccataaaaattgacaggagactgactggatccagtttcatt
gatgaaccactacaacaggtgatccagtttgctctgagagattacatccagtactggtac
tacactctgagcgaggatgagtccttcttattggagatcagacagacgctgcagaatgcc
cttgtccagttctctacacggtccaaagaggtggactggcagccttacttcaccactcgc
ctggtggacgattttgccacccatttacgtgtcttcagaaaagcccaggatcgcctcgct
gagagagaggacaagcaaagggacataacagaggagctggtggactccttctttgaggcc
gaggtggagatggaaaggaagatttgtcgagacgtagtttgcacttcacacaaagatgaa
gaaggttttcttcgagacttgtgtgagttgcttctgtatctgttactacctcctggagat
ttccacaacaagaacatgagatacttcctaagggaggtgctggcgcgtggtgtgctactt
cctctgatcaaccagcttagcgacccagactacatcaaccagtttgtcatctggatgatc
cgggactccagctgtaactatgaagccttcatgaacatcctgaagctcacagacaatccc
actgagctggaggccgtcaaggacaaggtgctggaggagctgcagtacctccgctctctg
gacactgccggagatgacatcaatgtgatcaagaaccagattaacagtcttctgtttgtg
aagaaggtgtgtgagactaggatccagagactacactctggcaaggaggtggatgccttg
aagctggcagccaactttggcaagctgtgtgttatcccactggatcacatcctcatccac
aacatcgccctgcagttcttcatggacttcatgcaggcagcgggggcccaggcagagctg
ttcttctggctcactgtggagggttacagggtgactgcgcagcagcagctggaggtcatg
cagggcttgcaggcggatggcaagaagcagcccagcgccaccaaggggctgctgaaggcc
gctgcactgggcgtctacgaacaatacctctcagacaaggcgtctcccagggtgcaggtg
gacgaagcatccgtaacaacactaggagagaagctacagaaagacgaccccacgccagag
atatttgatgaaatccagagaaatgtgtacgagatgatgctacgtgacgagcgctactac
ccctccttcaagcagagtcccctctatgtccgcatgctagcagagttagacatgttgaaa
gagccgagctaccgggggtctgatgacggcgacgtcgaatccttcaacggctctcccaca
ggaagcataaatctatctttggacgacttgtccaactcctgccatgatgaatctatgcac
ctacatgccttcatctctgacacaggggtgtgcaacgaccacggtaagacctacgcgctg
tacgccatcaccgtgttcagacgcagccatgacggcagtgaggactgctggaagacctat
cgccgctactctgacttccacgacttccatatgaggatcactgaacagtttgagaacctg
gtgtcgatcctcaagctgccagggaagaagaccttcaacaacatggacagagaattcttg
gagaagagaaaaaaagacctcaatgcttacctacagttgctgctgaactccgagatggtg
aaggcctgtccaacgctgattccttatgtatatgacttcctagagaacaaggcctacagc
aagggcaagggagagtttgcacgcaagatagacacatttgtaaatcctctgaagagctcc
atgagaaacgtgtccaacgtggtgaaggccttgccagacagtctggctgaaggcatgacc
aaggtctctgataacatgggccgcatgtcagaaagactgggtcaggacatcaaacagtct
atactcaaggtgcctccgctcctccccaagtctgacatcgaccctgaacactgtcgggtc
tctgctcagcttgatgacaacgtggatgataacatcccgctgagggtaatgctgctgctg
atggacgaagtgtttgacctcaaggagaaaaaccagtggctgcgcaggaacattaagaac
ctgctgcagcagctcatccgagccacgtatggagacaccatcaacaggaaaattgtggaa
catgtggactacatgacctctcctgagcaggttgcagactatgtcaagaagttcagagat
tcctactggcccaacggtattctggctgagacgccgccccgtcgggacaagagcatccgc
atgaggacacgaatagctgccaagactagtctgctgggcatcatgccagacgagctgaag
cacatcatcggagcggacaccacgagaaaagggattctccgtgtcttcgacatgtttcag
taccaacccatgaaccgccggctagtctacgttttcctggagggcttcttggagacgatg
ttcccccagtacaaattccccgagctctttgtcaagctgcactcccgctcgccacgcatc
cacagatatggccagaaacataaatcctcttccctcaagaggtga
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