Anoplopoma fimbria (sablefish): 129097295
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Entry
129097295 CDS
T09102
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129097295 (zgc:91944)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129097295 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
Motif
Other DBs
NCBI-GeneID:
129097295
NCBI-ProteinID:
XP_054462075
LinkDB
All DBs
Position
10:complement(21025796..21037689)
Genome browser
AA seq
505 aa
AA seq
DB search
MRQWCVPAATPRTEPLPGRLSVSPPPPDARMECCEVEPRYTIEQIDLLQRLRLSGMTKPQ
IIHALESLERLDPDHRPPHCDSQPAPSNATPSAAAPAPSSSSSSSSSLSLASATTQTSGL
DGAALSPSNSYEASPPPLYPPSVAVQRTFSYDMMGDEEWDLEEKVEEYMRRDSNLVKEEI
KTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNNPGLRWS
ESQHSVSPVPRARGGDRDGTVAGASGCLPNPNTNLNPNPVWSRQRELLMHLLPWYTAAAA
AAQAQPGATLSMRSLVKEEPDWRTGIMAGDRAALVGGPLRLRRGSRFTWRKECQSIMESF
FMENQYPDEAKREEIANACNSVIQKPGCKLSEFERVTALKVYNWFANRRKEMKRRANIEA
AILESHGIEVPSPSCHSNGEEGEMHEFADQVNHRFSEQEETSSHRIVDQQDPSSLASTEA
AALPSPPQVLDRKEEDSKRETVDEE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgcgtccccgctgcgacccctcgaaccgaaccactcccggggcgcctg
tctgtgtcgccccctccgccagatgccaggatggagtgctgcgaggtggagccgcgctac
accatcgagcagatcgacctcctgcagcgcctgcgtctctccggcatgaccaaacctcag
atcatccacgccttggagtccctggagaggctggacccggaccaccgccctccccactgt
gactctcaacccgccccgtccaacgccacccccagcgcggccgctcctgccccgtcctcc
tcttcgtcctcctcctcctcgctctccctagcctctgccaccacgcagacctccggcctg
gacggcgccgcgctctcccccagcaacagctacgaggcctcccctccgcccctctaccct
cccagtgtggcggttcagcggacgttcagctacgacatgatgggagacgaggagtgggac
ctggaggagaaggtggaggagtacatgaggagagacagcaacctggtgaaggaggagatc
aaaacgttcctcaacaaccgcaggatctctcaggcaatcgtaggccaagtaacaggcatc
agccagagctacatctcgcagtggttgctgcagcagggcctggagatgagcgactccaaa
cgccgcgccttctaccgctggtacctgctggagaggaataacccagggctgaggtggagt
gaaagccagcacagcgtgagtcccgtgcccagggccaggggcggggacagagacgggacg
gtggcgggggcgagcggctgcctccccaaccccaacaccaacctcaaccccaaccccgtg
tggagcaggcagagagagctgctgatgcacttgctgccgtggtacactgccgccgccgcc
gccgcccaggcccagccaggggccaccttgtcgatgcggtctctggtgaaggaggagcct
gattggaggacggggatcatggccggcgacagagcagcgctggtgggcggtcccctgagg
ctgcgcagaggaagcaggttcacctggaggaaggagtgccaatcaatcatggagagtttc
ttcatggagaaccagtacccggacgaggccaagcgagaggagattgccaacgcctgtaac
tccgtcattcagaaacctggctgtaagctgtctgagtttgagcgtgtgacggcgctgaag
gtctacaactggtttgccaaccgtcggaaggagatgaagagaagagcgaatatcgaagct
gccattttggaaagccatggaatcgaggtgccaagtccaagctgccactcaaacggtgag
gagggagagatgcacgagttcgccgaccaggtgaatcatcgattctcagagcaggaagag
acctcttcccacaggattgttgaccaacaagacccgtcctcgttggcgtccacggaggcc
gcggccctgccgagcccccctcaggtcctggatcgcaaggaggaggattcaaaaagggag
actgtggatgaagagtga
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