Anoplopoma fimbria (sablefish): 129097321
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Entry
129097321 CDS
T09102
Symbol
nfatc1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
afb04148
Efferocytosis
afb04218
Cellular senescence
afb04310
Wnt signaling pathway
afb04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129097321 (nfatc1)
04310 Wnt signaling pathway
129097321 (nfatc1)
04020 Calcium signaling pathway
129097321 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129097321 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
129097321 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129097321 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129097321 (nfatc1)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
129097321 (nfatc1)
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Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
129097321
NCBI-ProteinID:
XP_054462117
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All DBs
Position
10:11849294..11887533
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AA seq
871 aa
AA seq
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MKSAEEEAYGYTPNVSLSLPLGNPCLPSQYHSLQASPTISVSITEPHGYDDQDDMRAAGY
YSSSRPNGAPTLESPRIEITAYGQFPEDEVEKSNLPVGKRVNSIVTLTLPSVDGYRDPSC
LSPASSISSRSCHSDASSYESSFSYNYDNSPQNSPWQSPSVSPKGSTLTLPGDGCTSAGX
PRHSPSTSPRTSVTEDTWMGQRGSRPNSPCGAKRKYSFNGSGGPQKHYPYSPNLSPGLSP
QTSPRLSITEETWLPNTNQYTNSAILAAINALTTDGVVDLGEGIPIKARKTSMEHSPTIS
LKLEPGGEGLSPGELCQDDHPSNRLPLKKEGYCGGFLDVPQHPYSWSKPKQYVSPSLPAL
DWQLPSTSGPYSLQIDVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMESEPLTLQ
LFIGTADDRLLRPHAFYQVHRITGKTVSTPSHEALHNNNTKILEIPLLPENNMRAIIDCA
GILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQATGRTVSLQVSSNPIECSQRSAQE
LPLVDKRSLETCPAHGGERMLIDGHNFQHDSKVVFVEKAQDGHHLWETEAKVDRDASKPN
SLLVEIPPYRSQRLSTPVHVNFYVCNGKRKRSQYQRFTYVPASAPTIKTEPRDDFDAPLV
CSQRGLSLHPKPYFPPQVMTPMMTSDIRPCVVGGPFPVGLAAKSSPLPASSSPSTSPKLH
DLSPPPPPPFPKCLSTGPQVQHPGQQSPISHVSIIQETPGRYQPPSFYPPSSSSSSSSSS
SSSLPPTSQPSTPTDVCVTPGQPGSGSTSPGAQQHPKGPPRGRGSLQEDGSPPGLAVSIK
QEPQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgctgaggaggaggcatacggctacacgccaaatgtcagtctctccctccca
ctgggcaacccatgtcttccctcccagtaccacagcctccaggccagccccaccatatcc
gtctccatcaccgagcctcacggttacgacgaccaggacgacatgagagcagccggctac
tattcatcctcccgcccgaacggggccccgaccctggagagtcctcgcatcgagataacc
gcctacggtcagtttcccgaggacgaggtggagaagagcaacctacccgtcggcaagcgc
gtcaactccatagtgacgctgaccctcccgagcgtcgacggctaccgtgaccccagctgc
cttagcccggccagcagcatctcgtctcgcagctgccactccgacgcctcctcctacgaa
tcgagcttctcctacaactacgacaactcgccccagaactccccctggcagtcgccctct
gtgtcgcccaagggctcaaccctcaccctgccgggagacggctgcacctctgccggcntc
ccccgccactccccctccacctctccgcgcacaagcgtgacagaagatacctggatggga
cagcgaggctccaggcccaactccccatgcggtgcgaagaggaagtatagcttcaacggc
agcggggggccccaaaagcactatccatactcgcccaacctctcgcccggactgtcaccg
cagacatcccctcgcctcagtatcacggaggagacctggctgccgaacaccaaccagtac
accaactcggccatcttggcggccatcaacgccctgaccacagatggggtggttgaccta
ggggagggaatccccatcaaagcccgtaaaaccagcatggagcacagccccacgatcagc
ctgaagttggagcctggaggcgaggggctgagtccaggggagctctgtcaggacgaccac
ccctccaaccgcctgccgttaaagaaggagggctactgtggcggtttcctggatgtgcca
cagcacccatactcctggtccaagccaaagcagtatgtcagcccatcccttcctgctctc
gactggcagctgccgtccacctcggggccgtacagcctgcagattgacgtgcagcccaag
tcccaccaccgagcccactacgagacagagggtagcaggggagcggtgaaggctctggcg
ggaggacacccagtcgttcagctccacggctacatggagagcgagcctctgaccctgcag
ctgttcatcggtacggctgacgacaggctgctgaggccccacgccttctaccaggtccac
cgcatcaccgggaagacggtgtccaccccgagccacgaggccctgcacaacaacaacacc
aagatcctggagatcccgctgctgccagagaacaacatgcgggccataatcgactgcgca
gggatcttgaagctgcgcaactctgacatcgagctgaggaagggggagacggacatcggg
cgcaagaacacgcgcgtgaggatggtcttcagagttcacatcaaccaggccacgggcaga
acggtgtccttgcaggtttcatccaaccccattgagtgctcccagagatcggcccaggag
ctgccgctggtggacaagcggagtttggagacgtgtcctgcgcacggtggggagaggatg
ctcatcgacggacacaacttccagcacgactccaaggtggtgtttgtggaaaaggctcaa
gatggtcaccacctctgggagactgaagccaaggttgatagagacgcctcaaagcctaat
tcactactcgttgaaatccctccctatcggagccaaagactctccactccggtccacgtg
aacttctacgtctgcaatggcaagaggaaaagaagccagtaccagcgcttcacctacgtc
cctgccagtgcaccgacgataaagacggagccacgcgacgacttcgacgcccctctggtg
tgcagccagcgcggcctgtccttgcacccaaagccatacttcccccctcaggtcatgacc
ccgatgatgacctctgacatcaggccgtgcgtggtgggcgggcctttccctgtcggtttg
gcagccaagtcctccccgctgcccgcctcctcctctccgagcaccagccccaaactgcac
gacctgtcgccgcccccgccgccgcccttccccaagtgcctctccaccggcccgcaagtc
caacacccgggccaacagtccccgatctctcacgtctccatcatccaggagacgcccggg
cgctaccagccgcctagcttctacccacccagcagctcctcctcctcctcctcctcctcc
tcctcctccctccccccgacctcgcagccctccacgccaaccgacgtctgcgtgacacca
gggcagccgggcagtggcagcaccagtccaggagctcagcagcaccccaaggggccacca
agggggcggggttctcttcaggaggacggcagcccgccggggctggctgtcagcatcaaa
caagaaccgcaggagctggaccagatgtacctcgatgatgtcaatgagatcatcaggaac
gacctgtcgagcatctccgtccacagccacgcgtag
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