Anoplopoma fimbria (sablefish): 129097338
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Entry
129097338 CDS
T09102
Symbol
rp9
Name
(RefSeq) retinitis pigmentosa 9 protein
KO
K19604
retinitis pigmentosa 9 protein
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129097338 (rp9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129097338 (rp9)
Spliceosome [BR:
afb03041
]
Complex A
U2 snRNP components
U2 related factors
129097338 (rp9)
Complex B
129097338 (rp9)
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129097338 (rp9)
Complex C
U4/U6.U5 tri-SnRNP related factors
129097338 (rp9)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SR-25
DUF7792
AP3D1
Motif
Other DBs
NCBI-GeneID:
129097338
NCBI-ProteinID:
XP_054462135
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All DBs
Position
10:3807149..3814804
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AA seq
216 aa
AA seq
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MSDKKRRREKDDRREHKRHKSSKQDLEKLKTHTKKLNQEVQQLKHVETFYEKPPPGLIKE
HEDKPEDCIPAEPGNEEARTFLASAPTRGLWMPLGKEVKVMQCWRCKRYGHRTGDRECPF
FIKGNQKLEQFRVAHEDPMYDIIRENKRNEKETRIQQLQQMLQDTTSSSSDSSSSSSDHH
RSKKRKKRKDKKKKDKKRKGKRKHKSSKTSDCSDSD
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaaagcgaagaagagagaaggacgaccgacgagaacacaagaggcacaag
tcctccaaacaggatctggagaaactcaaaacacacaccaaaaaactcaaccaagaagtc
cagcagctgaaacacgtcgagacgttctatgagaagcctccaccagggctcataaaggag
cacgaggacaaaccagaggactgtattcctgctgaaccaggaaatgaagaagcaaggacc
ttcctggcaagcgcccccaccaggggtctgtggatgcctctggggaaggaggtgaaggtg
atgcagtgttggagatgtaagcgctacggccacaggacgggagacagggagtgtccgttc
ttcatcaaaggcaaccagaaactagagcagttcagagtggctcatgaagacccgatgtac
gacatcattcgggaaaacaaaaggaatgaaaaagaaaccaggatccaacagctgcagcag
atgcttcaagacaccacttcctccagttcagacagctcctcttcctcgtcggaccaccat
cgcagcaagaaaaggaaaaagaggaaggacaaaaagaagaaagacaagaagagaaaaggg
aaacgaaagcacaagtcctccaaaacctctgactgctccgattccgattga
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