Anoplopoma fimbria (sablefish): 129097341
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Entry
129097341 CDS
T09102
Name
(RefSeq) T-cell differentiation antigen CD6-like isoform X1
KO
K06456
T-cell surface glycoprotein CD6
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129097341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afb04090
]
129097341
CD molecules [BR:
afb04090
]
Proteins
129097341
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SRCR
SRCR_2
DUF3923
At5g65660_helical
ADK_lid
Motif
Other DBs
NCBI-GeneID:
129097341
NCBI-ProteinID:
XP_054462139
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Position
10:complement(12249624..12261834)
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AA seq
626 aa
AA seq
DB search
MTAEGNNTRGIIQKEFNSDPYIHKLAGKCSFTLRVHGNRSSDMVALPADSTDVLVEQMCQ
DLDCGRVYHVNKTNSPPNAICFHDCLYRDGRLQNCSQSMGVNCTVIAEAVCGQQAVRLSG
GSDRCAGRVELWRDGKWGTVCDDQWDLRDAHVVCAQLGCGYALRVTGQGGSFPPGRGPVH
LDELNCTGREENLWACPAAQDEPDCGHKEDAGVVCSEMRAVRLTGGLDRCSGKVEVHRNG
SWGTVCDNCWNKNIASMVCSMLRCGSRPQQFSQFIPFLTLNDGAQWFYLCDRDAQSLWQC
KEFVNSTHLCISSKASGVICNGSLGFPEAITSTTTNATILTSWTDVSVPKGATSVDGAGG
FDTVKVLLTSTIALALLLLVVLITNSVLCCHYRRRHAFLIQQTGSSPRPDPEHHHNNYQG
AVDLVKVTSNPLQTEAPSNPRYLWTQLSSVDSTSIDTDYEQYEPSNEPSYPLSTFRNSQR
YRADVNPLVRPSGLDSLCEEAPEPTEEVMGVFSGCNGGPEEAQYARVSKISVDSFDTSST
SSGENYENTNNGYVIVAPEPGLAQSPVVNDAFDPSRLVCSNDQLNLGQMTNLQNSSDEDN
GPIYSPVSPDQDSPSEDDYDDVDIIQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagagggaaataatacaagagggataatacaaaaggaatttaacagtgaccct
tacattcacaaactcgctggtaaatgcagcttcacgctaagggtgcatggaaacaggagc
agtgatatggtggcattgccagcagactctacagatgtgctggttgaacagatgtgtcag
gatctcgactgcggcagggtctatcatgtgaataaaaccaactcacctcccaatgccatc
tgctttcacgactgtttgtaccgagatggtcgtttgcagaactgttcacagagtatggga
gttaactgcactgtgattgctgaggctgtttgtggccaacaggctgtgcggctgtcagga
gggtcagaccgctgtgccgggcgggtggagctgtggagagacgggaagtggggcaccgtg
tgcgacgaccagtgggacctgcgggacgcccacgtggtgtgcgcccagcttggctgcggt
tacgccctacgtgtgacgggacagggcggctccttccccccgggaagaggaccggtccac
ctggacgagctgaactgtaccggcagagaggagaacctgtgggcctgtccggccgcacag
gacgagcccgactgcggacacaaagaggacgctggggtcgtatgctcagagatgagagca
gtcagactgactggtggtctggaccgctgctctggtaaagtggaggtccaccgtaacggc
agctggggtactgtgtgtgataactgctggaacaagaacattgcctccatggtgtgctcc
atgctgcggtgcggttccaggccgcagcaattctcccagtttattccctttctcaccctc
aacgacggggcacagtggttctatctatgcgatcgagacgcgcagagtctgtggcagtgc
aaggagtttgtcaactcaacgcacctgtgcatatcttcaaaggcatccggggtcatctgt
aatggttccctcgggtttcctgaagccatcacatccaccacaactaatgcaactatattg
accagttggacggatgtgtccgtcccaaaaggagcgacctcagtcgatggggctggaggc
ttcgacacagtgaaggtgctgctcaccagcaccatcgctctggctcttcttcttcttgtg
gttctcatcaccaactcggtgctctgctgccattacagaagacgacacgcgttcttaatt
cagcagactggcagcagcccacgaccggaccccgaacatcatcacaacaactaccaaggc
gccgtcgacctcgtcaaggtcacttccaaccccctgcagacagaagccccctccaatccc
aggtatctttggacccagcttagtagcgttgacagcacgtccatagatacagactatgag
cagtatgagccaagcaatgagccgtcttaccctttatcaacctttcggaattctcagagg
tacagagcagacgtgaaccctttggtgaggccctctggtctcgacagcctctgcgaggaa
gctcctgaacccacagaggaggtgatgggagtcttttcaggctgcaatggcggccccgaa
gaggctcaatatgcaagagtgtcaaagatctcagtggactcattcgatacctccagtact
tcctctggggaaaactacgaaaacacaaacaacggctatgtcatcgtcgctccggaacca
ggactggcccagtcacctgtcgtcaacgatgcctttgacccttcaaggctcgtctgcagc
aatgatcaacttaacctcgggcaaatgacgaacctgcagaattcgagcgacgaagacaac
ggcccaatctactctcctgttagccccgaccaagactctccatctgaggacgactacgat
gacgtcgacatcatacagtaa
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