Anoplopoma fimbria (sablefish): 129097410
Help
Entry
129097410 CDS
T09102
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129097410 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129097410 (snx27a)
Membrane trafficking [BR:
afb04131
]
Protein recycling
Others
Others
129097410 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
129097410 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
VirE3
USP7_C2
DarA_N
RBD
Motif
Other DBs
NCBI-GeneID:
129097410
NCBI-ProteinID:
XP_054462229
LinkDB
All DBs
Position
10:8402593..8416874
Genome browser
AA seq
568 aa
AA seq
DB search
MDKMADVEDDETRSAPPSASRNGPVVGSSAGTAGQNTASVTVTSGPRMVRIVKSESGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHK
QVVDLIRAGEKELVLAVLSVPAQEADGLEGGEEVQPNYDYSDKQAVPISVPTYKHVEQHS
ERFVVYNVYMSGRQLCSKRYREFAILHQNLKREYSNFNFPKIPGKWPFSLSEQQLDARRR
GLEEFLERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTT
DQVYQALVMKVGMDSIMASYFALFEVINHSFVRKLVPNEFPHKLYVQNYTSAVPGTCLAL
RKWLFSFQEEELLRDNPLALHYCFHQALEDVKKGFIKTEDKSYQLQKLAEQRKMATYLSL
LRTCEGYNEVAFPHCSCDSRRKGHVITAISINHFKLHACTEDGTLENQVIAFEWAEMQRW
DTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNK
NCSDNEYLPPLETQQKGWRHLGGEIATS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggataagatggcggatgtagaagacgatgaaactcggtccgctcccccttcggcatcc
cgtaacggtccggtcgtcggttcgtctgcggggaccgcgggccagaacacagccagcgtt
acggttacgtcaggtccgcggatggtgaggatcgtcaagtcggagtccggctacggcttc
aacgtccgcggacaagtgagcgagggaggacagctgcggagcatcaacggggagctgtac
gctcctctgcagcatgtcagcgccgtgttgcccggaggagcggcggaccgagccgggata
tcaaagggtgacaggatcctggaagttaatggggtgagcgtggaaggtgccacccataag
caggtggtggacctcatccgtgcaggggagaaggagctggttctggctgtgctgtctgtt
ccagctcaggaggctgatggattggaaggaggagaggaggtccaacccaactatgactac
agcgacaagcaggcagtgcccatttccgtacccacatacaaacatgtagagcagcactct
gagaggtttgtggtatacaacgtgtacatgtcaggaagacagctgtgctcgaagcgctac
cgggagtttgccatcctgcaccagaacctaaagagggagtattctaacttcaacttccca
aagattcctgggaaatggcccttctccctgtctgaacagcagctggatgctcgccgtaga
ggcctggaggaatttctcgagcgagtttgctctgtgcgggtgatcggggagagtgacatc
atgcaggagtttctctctgaatcagatgagaactacaatggagtgacagatgtagagctg
cggatagccctgccagacaagaccaccatttctgtcagagtccgcaagaacagcaccaca
gaccaggtgtaccaggcattagtgatgaaggttgggatggacagtattatggcgagctac
tttgccctttttgaagtcatcaaccactcctttgtgcggaagctggttcctaatgagttt
ccccacaagctttatgtgcagaattacacgtcagcagtgccggggacttgcttggcgctc
cgcaaatggttgttcagcttccaggaggaggagttactaagagacaacccgctggcactg
cactactgctttcaccaggcattggaagatgtgaagaagggattcataaaaacagaggac
aaatcctaccagctgcagaaactggcagagcagcgcaagatggccacgtacctgagtctg
ttgcggacatgtgagggctacaacgaggtggccttcccccactgctcctgtgactccagg
aggaaaggacatgtcatcacagctatcagcatcaatcacttcaagctgcacgcttgtacc
gaggacggcacgctggagaaccaggtgatagcttttgagtgggcggagatgcagcgctgg
gacaccgatgaggaggggatggctttctgctttgaatacgccagaggggagaagaaacct
cgctgggtcaagatcttcactccatattttaactacatgcatgagtgctttgagcgggtc
ttttgtgagctgaagtggaggaaacaggttgaggaagaggcatctgacaaagacaacaaa
aactgcagtgacaatgagtatctgcctcctctggagacgcagcagaagggatggcgccac
ctagggggggagattgcaacttcctaa
DBGET
integrated database retrieval system