KEGG   Anoplopoma fimbria (sablefish): 129097410
Entry
129097410         CDS       T09102                                 
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
  KO
K17936  sorting nexin-27
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129097410 (snx27a)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:afb04990]
    129097410 (snx27a)
Membrane trafficking [BR:afb04131]
 Protein recycling
  Others
   Others
    129097410 (snx27a)
Domain-containing proteins not elsewhere classified [BR:afb04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   129097410 (snx27a)
SSDB
Motif
Pfam: PX PDZ PDZ_6 RA SNX17-27-31_F1_FERM RA_2 SNX17_FERM_C PDZ_2 SNX17-31_F2_FERM VirE3 USP7_C2 DarA_N RBD
Other DBs
NCBI-GeneID: 129097410
NCBI-ProteinID: XP_054462229
LinkDB
Position
10:8402593..8416874
AA seq 568 aa
MDKMADVEDDETRSAPPSASRNGPVVGSSAGTAGQNTASVTVTSGPRMVRIVKSESGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHK
QVVDLIRAGEKELVLAVLSVPAQEADGLEGGEEVQPNYDYSDKQAVPISVPTYKHVEQHS
ERFVVYNVYMSGRQLCSKRYREFAILHQNLKREYSNFNFPKIPGKWPFSLSEQQLDARRR
GLEEFLERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTT
DQVYQALVMKVGMDSIMASYFALFEVINHSFVRKLVPNEFPHKLYVQNYTSAVPGTCLAL
RKWLFSFQEEELLRDNPLALHYCFHQALEDVKKGFIKTEDKSYQLQKLAEQRKMATYLSL
LRTCEGYNEVAFPHCSCDSRRKGHVITAISINHFKLHACTEDGTLENQVIAFEWAEMQRW
DTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNK
NCSDNEYLPPLETQQKGWRHLGGEIATS
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggataagatggcggatgtagaagacgatgaaactcggtccgctcccccttcggcatcc
cgtaacggtccggtcgtcggttcgtctgcggggaccgcgggccagaacacagccagcgtt
acggttacgtcaggtccgcggatggtgaggatcgtcaagtcggagtccggctacggcttc
aacgtccgcggacaagtgagcgagggaggacagctgcggagcatcaacggggagctgtac
gctcctctgcagcatgtcagcgccgtgttgcccggaggagcggcggaccgagccgggata
tcaaagggtgacaggatcctggaagttaatggggtgagcgtggaaggtgccacccataag
caggtggtggacctcatccgtgcaggggagaaggagctggttctggctgtgctgtctgtt
ccagctcaggaggctgatggattggaaggaggagaggaggtccaacccaactatgactac
agcgacaagcaggcagtgcccatttccgtacccacatacaaacatgtagagcagcactct
gagaggtttgtggtatacaacgtgtacatgtcaggaagacagctgtgctcgaagcgctac
cgggagtttgccatcctgcaccagaacctaaagagggagtattctaacttcaacttccca
aagattcctgggaaatggcccttctccctgtctgaacagcagctggatgctcgccgtaga
ggcctggaggaatttctcgagcgagtttgctctgtgcgggtgatcggggagagtgacatc
atgcaggagtttctctctgaatcagatgagaactacaatggagtgacagatgtagagctg
cggatagccctgccagacaagaccaccatttctgtcagagtccgcaagaacagcaccaca
gaccaggtgtaccaggcattagtgatgaaggttgggatggacagtattatggcgagctac
tttgccctttttgaagtcatcaaccactcctttgtgcggaagctggttcctaatgagttt
ccccacaagctttatgtgcagaattacacgtcagcagtgccggggacttgcttggcgctc
cgcaaatggttgttcagcttccaggaggaggagttactaagagacaacccgctggcactg
cactactgctttcaccaggcattggaagatgtgaagaagggattcataaaaacagaggac
aaatcctaccagctgcagaaactggcagagcagcgcaagatggccacgtacctgagtctg
ttgcggacatgtgagggctacaacgaggtggccttcccccactgctcctgtgactccagg
aggaaaggacatgtcatcacagctatcagcatcaatcacttcaagctgcacgcttgtacc
gaggacggcacgctggagaaccaggtgatagcttttgagtgggcggagatgcagcgctgg
gacaccgatgaggaggggatggctttctgctttgaatacgccagaggggagaagaaacct
cgctgggtcaagatcttcactccatattttaactacatgcatgagtgctttgagcgggtc
ttttgtgagctgaagtggaggaaacaggttgaggaagaggcatctgacaaagacaacaaa
aactgcagtgacaatgagtatctgcctcctctggagacgcagcagaagggatggcgccac
ctagggggggagattgcaacttcctaa

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