Anoplopoma fimbria (sablefish): 129097435
Help
Entry
129097435 CDS
T09102
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
afb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129097435 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129097435 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129097435 (nup153)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129097435 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
129097435
NCBI-ProteinID:
XP_054462264
LinkDB
All DBs
Position
10
Genome browser
AA seq
1492 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKNKQQQSGLISRVTDTVKSIVPSWLQKYFKNEDAPEGG
GAVLGTDQNCQPPPPPNGSEEEPPPLDGCDSPEPSTSYTEPSTSRASLNFQDYVLSRPPL
SRSHLHFPPLDISSPTLGATSSLFSQPSTSSAPGPFSTGFSLVKEIKDNLSQHEDDNIST
TSGFSSRASEKDVPTSKTASLPQLWSPEMDRTHSGPQPFQSSLRKPSFNLSVFGNSSNSS
LNSTVLNSSQLGDSPFYPGKTMYGGAAAVRSARARPGTPYQAPVRRQIKAKPAGAQPCGV
TSATARRILQSLERMSSPLADARRIPAVASSPLSASMDGTNLDVSHFQAKKKRMDSPLPP
VQKLVVPVAASVSGNRSVSFRPTLTPGGVSRTLDRTPRETPTRQSPQLPEAAPGPSRSTM
GSSGPAYPLSSTPVASSVSSGGGKMKRERTSTRPSSKRPEEEEVAEVPDLPTISLPISTS
ALPTFSFSSPLPPVPTSTTNSASPILTHLTPAKETVTKKEPTTALTPPCVPFTFSSPIVK
ATAASPPSFSPSAGFTFSAPVAKLGPSMSNGKLASPIVAAVKSATSTSTEDFDGPFKPAK
TLKQGSVLDLLKSPGFASPVAKTSPGPDDAGLQTSTQSTAPSSSTTTTTSALSTAGFSDV
FKAPPGWSCDVCLVQNKSSDTKCVCCMAPQPSSSKSMDSKPSMATSVGLESSSTNTTSTT
TTTAGFGTMFSKPAGTWDCDTCLVLNKPDAVKCVACETAKPGTGLKPSLTLPSAFSAVKT
VSTPTAPVSTGFIGFGDKFKKPTGSWECDTCLVENKAENTKCVACMSAKPGASAGASSSA
SSAPVFGLGDAFKKPEGAWDCDVCLVQNKAADVQCVACQTVKPGAKVEPKAFGSSFDSST
NSGGFKFGTSDSTSGSGSVGFKFGSSLTESSSSSGGFKFGVQFGSSSSETTSKDTTDSSG
FKFGSSSEGFKIGTASSDDRKADQSAVGSGFKFGASGGIAFGTGSSSTESNSSKGGFTFG
LSKPKEKTPDTTTTSPSLSFTPPASSQEKSEGAASSNDTTSTTTTTTTGSAVFGSLSTTT
PQGGSTFGSLQTDTEPAAPTFNFGKPEEKKEAAASPAPSGFLFGAANKEADVAPANSGGF
SFSKPSAQTEQPPPPYNFGKPADKSETSTAEAPKHSFGFGQIADSSAAPKQAFSFMVGNP
TNTVNSTTSSSTTPTPNLFGTTTTTTTSSNNGNSATQAPAPSAAPSNFMFGQTAATSSDA
PPAKAFVFGQSQDTQPPAPSAAPLNSTPAPAPSQPFIFGAPASAAAAPAAAAPSFGFGAA
APTAASSSAQSAAPSPFAFSSAPSGGFGANQTSSFGSSFGSPFTATPSQPPAFGAKPNAT
PVFGQQTNSTPVFGAAANSAQGAGFQFGGASAFGATNNASAGVFTFGAGSAASPAPPANP
SIAPQPGPPGDGFNFAQPPAFNIGAAKNFTASPAGQQAIAGRKIKTAVRRRK
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaatcagaagcaggagatatcacatcgcctctaaacct
tacgccaagaataaacagcaacagtcaggcctcatcagtcgagtgacagacacagtaaag
agcatcgttccttcctggctgcagaaatacttcaagaacgaagatgctcctgaaggagga
ggggctgtactggggacagaccagaactgccagcccccacctcctccaaatggcagcgaa
gaggaacctcctccccttgatggatgcgactccccagagccaagcaccagttacacagag
ccctcaaccagccgggcatccctaaactttcaggactatgtgctttctcgacctccactg
agtcgttcgcacctccactttccgccgctggatatctcctccccgaccctgggggccacc
agcagccttttctcccaaccctccacctcctccgcccctggacccttttcgacaggcttc
tccttggtcaaagaaatcaaggacaacctctcgcagcacgaagatgataacatctccacc
actagcggcttctcctcccgcgcctcagagaaagatgtccctacatccaaaacggcatca
cttccccaactttggtccccagaaatggacagaacacactctgggcctcaacctttccag
tccagtctgagaaagccttctttcaacttgtctgtatttggaaattcctccaattcgtca
ttaaacagcacagtacttaactcgagccagctcggagattcacccttctaccccgggaag
accatgtatggtggggcagctgcagtcaggagcgctcgtgctcgtcctggaacaccatac
caggccccagtgaggagacagatcaaggccaagcctgctggtgctcagccctgtggggtg
accagcgccacagccagacgcatccttcagtccttggagcgaatgtcaagtcctctagct
gatgccaggagaatcccagcagtggcctcatcccccctgtcagcatcaatggatggcaca
aatctagatgtttcacatttccaggccaaaaagaaacgtatggattcccccctcccaccg
gtgcagaagctagtggttcctgttgcagcgtcggtgtcaggaaaccgctctgtgtccttc
aggcctactttaactcctggaggagtgagccgaactcttgacaggaccccaagagagacg
cctacaagacaatctccacaattacccgaagcagccccaggtccatctcgaagcacaatg
ggttccagtggcccagcctatcctctgtccagcacgcctgtagccagcagcgtgagctct
ggagggggcaagatgaagagagagaggaccagtacacggccttcctctaaacgccctgaa
gaggaagaggtggctgaggtaccggacctaccaaccatttcacttcccatcagcacatct
gccttgcccaccttcagcttctcctctcctcttccccctgtccccacctccaccaccaac
agcgcgtctcccatcctcacgcacttgactcccgctaaggaaacggtcacaaaaaaggag
ccaacaacggccttgacacctccctgtgtaccttttacattttcctcccctattgtcaaa
gcaaccgctgctagtcctccctccttttccccctcagctggatttacttttagtgcacct
gtagcaaagttaggaccctccatgtcaaatgggaagctggcctctcccatagtggcagca
gtgaagtccgcaacaagcacaagcacagaagattttgacgggcctttcaagccagccaag
accctgaagcagggcagtgtgttggatcttctcaagtcacctggctttgcttctcctgtt
gctaagacttccccaggcccagacgacgctgggctgcagacctccacacaatccacagcc
ccctcctcctccaccaccaccaccacctccgccctctctacagcagggtttagcgatgtg
ttcaaagccccaccaggctggagctgtgatgtctgcttggtgcagaacaagtcttcagac
accaaatgtgtttgctgtatggccccacagccctcctcatccaaatctatggacagtaaa
ccttcaatggccacctcggttggactagagagcagcagcacgaacaccacctccaccact
acaactactgcaggttttggcaccatgttctccaaacctgcaggaacttgggactgtgat
acatgcctggttctaaacaaacctgatgcagtaaagtgtgtggcctgtgaaacggccaaa
cctgggacaggacttaaaccctcactgactcttccttctgccttctcagctgttaagact
gtatccacacctacagcccctgtttctacagggttcatcggatttggagacaagttcaaa
aaacctactggttcatgggaatgtgatacgtgtttggtagaaaacaaggcagaaaacaca
aagtgtgtggcctgcatgagcgctaaaccaggagcttcagcaggagcctcttcttccgcc
agcagtgctccagtgtttgggttgggagatgcgtttaagaagccagagggtgcctgggat
tgtgatgtctgtcttgtacagaataaggctgctgatgtccagtgtgttgcctgtcagaca
gtcaaacctggagctaaagttgagcccaaagcttttggttcgtctttcgattcatcaact
aattctggaggttttaagtttggcacatcagacagtacctcgggatctggatctgtaggt
ttcaagtttggaagctcattgacagagtcctcctcttcatcaggtggattcaaatttggg
gtccaatttggaagctcctcatcagaaaccacttctaaagacactactgactcatcaggt
ttcaaattcggcagctcatctgagggctttaaaattgggactgcctctagtgatgacaga
aaggcagaccaatctgctgtaggttctgggtttaagtttggggcaagcggtgggatagca
tttggaactggatcatctagcacagagagtaactcctctaagggcggcttcacctttgga
ctgtcaaaacccaaggagaaaacaccagacaccaccaccacctcaccctctcttagtttc
actcctcctgcctcctctcaagagaaaagtgagggtgctgcatcatcaaatgacaccaca
tccacaaccaccaccaccaccactgggtcggcggtatttgggagtctgtcgaccaccaca
ccacaagggggctctacttttggatccttacaaacagacacagagccagctgctcccacg
tttaactttgggaagccagaggaaaagaaagaagccgctgcctcccctgctccgtctggc
ttcctcttcggtgctgctaataaagaagcagatgttgcaccggccaactcaggaggtttt
tccttcagcaagcccagcgctcaaacagaacaacctccacccccttataattttggcaag
ccagcagacaagagtgaaacgtctactgcagaggccccgaagcactcttttggctttgga
caaattgcagattcttctgctgctcctaaacaagcattttcctttatggttggtaatccc
accaacacggtcaactccaccacttcgtcatccaccaccccgacacccaatctgttcggc
actaccaccaccaccaccaccagcagcaacaacggcaacagcgccactcaagcccctgct
ccttctgcagctcctagcaatttcatgttcggtcaaactgctgcaacatccagtgacgct
cctccagccaaagcctttgtcttcggccagagtcaggacacccagccgcctgccccttca
gctgctcctctgaactctactccagctccagccccatctcagccctttatctttggtgct
cctgccagcgctgctgctgctcctgctgctgctgctccgtcctttggctttggagcagct
gcacccactgctgcctcatcttcagctcaatctgcagctccctccccatttgcattcagc
tcggccccctctggtggatttggggccaatcagacttcttcattcggttcctcttttgga
tcccccttcacagccacaccttcacagcccccagccttcggagccaaacccaacgccaca
cctgtctttggtcagcagaccaactccacacctgtatttggggcggctgctaattccgca
caaggtgcaggctttcagtttggaggagccagtgcatttggagccacaaacaacgcctca
gcaggagtgtttacttttggagcgggatcagcagcttctcctgccccccctgccaacccc
tccatcgcgccccagccaggacctccgggagatggattcaacttcgcacaacccccagca
ttcaatattggggcagcgaaaaacttcaccgcgtctcctgctggacagcaagcgattgcc
gggcgaaagatcaagacagcagtgcggcgcagaaagtag
DBGET
integrated database retrieval system
