Anoplopoma fimbria (sablefish): 129097470
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Entry
129097470 CDS
T09102
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129097470 (matn1)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
129097470 (matn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
Plasmod_Pvs28
EGF_3
HSBP1
hEGF
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
129097470
NCBI-ProteinID:
XP_054462318
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All DBs
Position
10:complement(4036912..4041312)
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AA seq
490 aa
AA seq
DB search
MTPTPPLFLLLLCLVGAQATVDLRTAAAMAAGLCKTRPTDIVFIIDSSRSVRPAEFEQVK
VFLVKVIEGLDVGPNATRVGVVNYASRVKNEVSLKTHRTKAGLIKAVTKIEPLSTGTMTG
LSIQFAMNVAFSESEGARVKSPDISKVAIIVTDGRPQDNVKDVAQRARDAGIEIFAIGVG
RVDMSTLKQMASDPLDDHVDYVESYSVIEKLTTKFQEAFCVSDLCATGDHDCEQVCISSP
GSYKCACKDGFTLMDNGRSCSACSNAATDVVFLIDGSKSVRPENFELVKKWINQIIDKLD
VSESKAHVGLVQYSSSVRQEFSLGRYNNKKDLKDAVKKMAYMERGTMTGQALRYLTDNSF
SGGQGARPGVAKVGIVFTDGRSQDYIGDAAKKAKEHGFKMYAVGVGNAVEDELKEIASEP
TGEHYFYTADFKAMTQIAKKLQINICQEEDPCECDTLVKFQKKVEDALQALTKKLDSMSK
RIALLENKIV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctaccccgccgttgttcctgctgctgctctgccttgtaggggctcaagccacc
gtggacctccgcacggccgccgccatggcggcaggtttgtgcaaaactcgtcccacggac
attgtcttcatcatcgacagcagtcggagcgttcgccctgcagagtttgagcaggtcaag
gtcttcctggttaaggtcatcgaggggcttgatgttggacccaacgccacccgtgtggga
gtcgtcaactatgccagccgcgtcaagaacgaggtgtctctgaagacgcaccgcaccaaa
gctgggctgattaaggccgtgaccaagatcgagcccctgtccactggaacaatgactggt
ctgtccatccagtttgccatgaatgtggccttcagtgagagcgagggcgctcgcgtcaaa
tctcctgacatcagcaaggttgccattattgtgacagacgggcgtccccaggacaacgtg
aaggatgtggcccagcgtgcacgggatgccggtattgagatctttgccatcggtgtggga
cgcgtggacatgagcaccctgaagcagatggccagcgatcctctggacgaccacgtggac
tacgtggagagctacagcgtcatcgagaagctcaccacgaagttccaggaggccttctgt
gtgtcggacctgtgtgccactggggatcatgactgtgagcaggtatgcatcagctccccg
ggatcatacaagtgtgcctgcaaagatggctttaccctcatggacaatggtcgcagctgc
agtgcttgcagcaacgcagcaacagatgtggtgttcctgatcgatggctctaagagtgtg
cgtcccgagaactttgagctggtcaagaagtggatcaaccagatcatagacaaactggac
gtttctgaaagcaaggctcacgtcggactggttcagtactccagctcagtcagacaggag
ttctccctgggccgctacaacaacaagaaggacctgaaggacgccgtgaagaagatggcc
tacatggagaggggaaccatgacgggccaggctctccgctatctgacggacaacagcttc
agcggcggtcagggcgcccggcccggagtcgccaaggtgggcatcgtcttcactgacgga
cgcagccaggactacatcggagacgccgccaagaaggccaaggagcatggtttcaagatg
tacgccgttggagtgggcaacgcagtggaggacgagctgaaggagatcgcctctgagccg
actggagagcactacttctacactgctgacttcaaagctatgacccagatcgccaagaag
ctgcagataaacatttgtcaagaggaggacccttgcgaatgtgacaccctggtaaagttc
caaaagaaagtagaagacgccctgcaggcactaacaaaaaaattagacagtatgtcgaag
aggatcgccttgctggagaacaaaattgtctga
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