Anoplopoma fimbria (sablefish): 129097543
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Entry
129097543 CDS
T09102
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129097543 (rnf115b)
04121 Ubiquitin system [BR:
afb04121
]
129097543 (rnf115b)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129097543 (rnf115b)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129097543 (rnf115b)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129097543 (rnf115b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
Zn_ribbon_19
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
U-box_ZFPL1
HypA
Motif
Other DBs
NCBI-GeneID:
129097543
NCBI-ProteinID:
XP_054462409
LinkDB
All DBs
Position
10:complement(8505347..8510165)
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AA seq
295 aa
AA seq
DB search
MAEAADTPQHRYFCHCCKSETNPKLPDFVCPRCDSDFIEEVTEDSSLLQSSTSVASEDSN
SLFSELWQLLFMERSALLLHPPSSESDPDDSEQASAGQSRPSSVSPGAAEAGEPESDSRP
EQERSSRPDQRPAVEGIVQQFLAGLFASNGNPNAAPAALSSMLQLHSNPGDYAWGQGGLD
AVITELLGQLECTGPPPAEKEMISSLPTVCISEEQTDCRLECPVCREEYSSGESVRKLPC
LHYFHSGCIVPWLELHDTCPVCRKSLDGVDNSLPSTSEPPEARSIRTEQQERQAI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggacacaccacaacaccggtatttctgtcactgctgtaaaagtgaa
acaaaccccaaactcccggatttcgtctgccccagatgtgactctgacttcattgaggag
gtgacagaagactccagtctcctgcagagcagcacatctgtggccagtgaagattccaac
tcgttgttctcagagttatggcagctgctgtttatggagcggtctgctctgctgttgcat
ccgccctcttcagagtccgacccagatgacagcgagcaggcatctgcaggtcagagccgc
ccttcttcagtgtcgccgggcgctgctgaggccggggaaccagagtctgattcacggcct
gaacaagagaggtcatccaggcctgatcaacggcctgcagtggaagggattgtgcagcag
ttcttggccggcctgtttgccagcaacggaaaccccaatgctgcaccagctgcactatcc
agcatgctgcagttgcattcaaaccctggtgattatgcgtggggtcagggaggtctggac
gctgtcatcacagagttgttaggacaattggagtgcacaggtccaccccctgctgaaaag
gagatgatctcatccttgccaacagtttgtatctctgaagaacagacagactgcaggctg
gagtgtccagtttgtagggaggagtattcatcgggggaatccgtcaggaagctaccctgc
ctccattacttccacagtggatgcatagtaccttggttggagctgcacgatacctgccca
gtgtgccgaaaaagccttgacggcgtcgacaacagcctcccgtccacatcagaaccccca
gaagctcgctccatcaggacagagcaacaggagaggcaggcaatctga
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integrated database retrieval system
