Anoplopoma fimbria (sablefish): 129097601
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Entry
129097601 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 1
KO
K09364
POU domain transcription factor, class 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129097601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129097601
03021 Transcription machinery [BR:
afb03021
]
129097601
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129097601
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129097601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129097601
NCBI-ProteinID:
XP_054462476
LinkDB
All DBs
Position
10:complement(13023825..13082231)
Genome browser
AA seq
792 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLAPRSSPDIRMSKAAEEEKPGAEYPGDSSDSNRN
SPDDQVQPMKTSPFSISPTPAGSKGKSEESSEMTHSTIPPAPPAPPSQQQQQQQQQQQQL
QLQQQQQQLQQQQQLQQQQQQQQQQQHHHTQLMLAGSQLAGLAALLPAQQQLLLQQAQAQ
LLAAAVQQSNAAHAAHAAHAAHVAAQQQANQQQQQNQSQSQQQQQQQTKQEQTVQVPPPP
QLALSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPAQFLLSQPAQAQQQQQQGLLSTQNL
IQLPQQSPGGLLTTPPRLGLQAQREKSSDVVGGSGGSIVATGSSGALTSVGATSASSSSL
TSGLTPGGHGGHMGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGVAMGKLYGNDFSQTT
ISRFEALNLSFKNMCKLKPLLEKWLSDAENMAIDSMLPSPSSLSSPMLGIEGLSGRRRKK
RTSIETNVRVALERNFCMNPKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRINPSSS
TTPPLPSQTSPVMTHKAPCYSPHMISSQGLSQVTTCLSTTCDSNLLHGVNIPILLLLSPL
AASPSASYPMTPVSSAAVGSTSSSVTPPPHSTASPAPPSLGAHGLNTGNTMMGVSTGMNQ
ALMGSNPLATMQALAASGGQLSISGLEGGAAHMLLGGPGGPALPHSLRPSLFLNRPTLLP
MVTGSMATPSTPGMGLVSGPRLSFSRSPXPGASDLLSPTSCPEESASPCSSPASFCSFSE
ASPPPLGGAMAE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggctccgcggtccagccccgatatcaggatgtctaaagca
gcagaggaggagaagcctggggctgagtatccaggggacagttcagactctaacagaaac
agccctgatgaccaggtccagccgatgaaaacaagccccttcagcatctcgcccacaccg
gctggcagcaagggaaagagcgaggagagctctgagatgacccacagcaccatccctcct
gctcctcctgcacctccctcccagcaacagcagcagcaacaacaacaacaacaacaacta
caactacaacaacaacagcaacaattacagcaacagcaacaactacaacaacaacagcaa
cagcagcaacaacagcaacaccaccacacacagctgatgctggctggcagtcagctagca
gggcttgcggctctcctcccggcccagcagcagctgctcctccaacaggctcaggctcag
ctcctggccgccgctgtccagcagtctaacgccgctcatgccgcccacgccgctcatgcc
gcccacgtcgccgcccagcaacaggccaaccagcagcagcagcagaaccagtcgcaatcc
cagcagcagcaacagcagcaaaccaaacaggaacaaaccgtccaagtcccgcctccaccg
cagctggccctgtcgcagccaatccagctcacagcccaggacatccagcagctgttgcag
ctccaacagctggttttgatgccgggtcatcatctccagtctcctgcccagttcctcctt
tctcagccagcgcaggcgcagcagcagcagcagcagggtttgctctcaacacaaaatctg
atccagctacctcagcaaagcccagggggactactgacaactccacctcgcctgggactc
caagcacagagggagaagagcagtgatgtggtcggtggaagcggcggttccatagttgcc
accggcagcagcggtgccctgacgtcagtaggagccacctcagcctccagttcctcgctg
acgtccggattgactcccggaggtcacgggggtcacatgggggaggagcccagcgacctg
gaggagcttgagcagtttgcccgcacctttaaacagcgacgcatcaagctgggattcacc
cagggggacgtcggcgtggcgatgggcaaactgtatggcaacgacttcagccagaccacc
atctcccgattcgaagccctcaacctgagctttaagaacatgtgcaagctgaaaccgctg
ctggagaagtggctgagtgatgcagaaaacatggccatagacagcatgctgcccagcccg
tcttctctctcttcccccatgctgggcatcgagggtctgtccggccgacgcaggaagaaa
cgcaccagcatcgagaccaatgtgcgagtggccttagagcgcaacttctgcatgaacccg
aagcctacctcggaggagatcctgctcatggcggagcagctcaacatggagaaggaggtg
atccgcgtttggttctgcaaccgcaggcagaaggagaaacgcatcaacccctccagcagc
accacgcctcccttgcctagccagacctcgcccgtcatgacacacaaagccccctgctac
agcccgcacatgatatcgagtcagggtctgtcccaggtcaccacctgcctcagcacaacc
tgtgactcaaacctgctgcacggcgtcaacatccccattctccttcttctctccccttta
gccgcaagcccttcagcatcctaccccatgaccccagtcagctcggccgcggtggggtcc
acctcttcttctgtgaccccgccccctcacagcacagccagccccgcccctcccagtctc
ggggcccatgggctcaacaccgggaacacaatgatgggagtaagcacagggatgaaccag
gccctcatgggcagcaacccgctggctaccatgcaagccctggcagccagcggcggtcag
ctttccatctccggcctggaggggggagcggctcacatgcttctgggcggacctgggggt
cccgccttaccccactccctccgcccctccctcttcctcaaccgccccaccctactcccc
atggtgaccggctccatggcaacgccctccacgcctggcatgggactggtcagtggcccg
aggctctccttttcccgatctcccnnccctggcgccagcgacctcctgagcccgacctct
tgccccgaggagtctgcctctccctgttcaagtcccgcctctttctgttccttcagtgaa
gcctcgccgccgcccctgggaggggccatggccgagtga
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integrated database retrieval system
