Anoplopoma fimbria (sablefish): 129097697
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Entry
129097697 CDS
T09102
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
afb04514
Cell adhesion molecule (CAM) interaction
afb04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129097697 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129097697 (ncam1b)
04517 IgSF CAM signaling
129097697 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129097697 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129097697 (ncam1b)
04090 CD molecules [BR:
afb04090
]
129097697 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129097697 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
129097697 (ncam1b)
04091 Lectins [BR:
afb04091
]
129097697 (ncam1b)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
129097697 (ncam1b)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
NCAM1/2
129097697 (ncam1b)
CD molecules [BR:
afb04090
]
Proteins
129097697 (ncam1b)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
129097697 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
Others
129097697 (ncam1b)
Lectins [BR:
afb04091
]
I-type lectins (Siglecs)
129097697 (ncam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
V-set_CD47
Pur_ac_phosph_N
C2-set_2
Ig_PDGFR_d4
C1-set
Fn3_ROS1
Adeno_E3_CR1
C2-set_3
Motif
Other DBs
NCBI-GeneID:
129097697
NCBI-ProteinID:
XP_054462582
LinkDB
All DBs
Position
1:22309094..22375886
Genome browser
AA seq
1228 aa
AA seq
DB search
MVQSGDIFLALLLVGCAVSLEVQIIPTHGEISLGESKFFMCEVVGVAKHIDWFGPSGDRI
EPNRPDITVTRNDESSSTLTLYKAGKENAGTYKCVATNGDQQGESTVKVKIFQKITFTNV
PSPQEFNEGDNAILVCDVISSPSPTVFWKYKGAKIQMEKDVRFKVLSNNHLQIRGIKKTD
EGSYTCEGRLMARGEIDLRVIKVVVNVLPTIRVWQSEVNATADVEQPAMLTCAVDGYPEP
MVTWTRNEVVLEAGEKYSFNDDGSEMTLMDVTKLDEGEYTCIAKNKAGEAEQELSLRVFV
KPKITYIVNQSTSEMEEQVTLTCEASGDPTPTISWSSGDHVFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYVRYTDAGQYLCRARSAIGEDDQSAFLEVRYAPKI
HGAVAVYTWEGNAVNVSCEVKAHPSDVSIVWLRDGLQLPNSNTTNIKIFRSPSASYLQIT
PESENDFGSYNCTASNEIGTESKEFLLIQAEVPSAPSISEVRPFSTTALIQFEEPESTGG
VPVLQYRAEWRAQGRGSWVHRVYEVQDGYTSEATITDLNPETGYEVKLSAVNGKGEGESS
PAEFFKTEPVRNPNPPKLEGALQPKGNSLKVRWIKQDDGGSPILHYLVRYKPIQVSEWKQ
EIRLPSGSDYVVLSGLEWDTEYSVYVVAENQKGKSLPATMSFKTSTQPDAIPDLGDEAAL
SMGIMLWAGILVVVFVLLLLAVDVTCYFVNKCGLIMCLCGKSGTGTKGHNVEEGKAAFMK
DESKEPIVEVRTEDECTANHNAAGPTEPNETTPLTEPELAAYTAALALDTLSSVATNSDT
ATATIDPAQDSPSSETTTLTCSLSTPANDPSPTPFLAPAPTPESTTAPPTPLIFTSDIAA
KMAPLVEQRGSNNQEEGEKKTTPPCTPEQTKVQKSGTPIPPKRRHSPKLAALNAKGSPPV
SPLAASSASSSPTPETKKPAPRPPVNKLPIQKHTVASDTEMPAQTAAALATTAPPKPDPD
SDTTARDPSGSSLTAFETTNKPADQTVDNNTAKDAATSCPSVIHGAPKVLDAEESAPLVA
DAPSPLPVTHISSTPSHVEAPFSNDLLTSPTDTYNFLTPDWGPIGADLELELTNGTERPS
PTLADLISLESPPSDPSLPNGDGADLPPSGPVLEASETLAKTATPVNDEKIFSDDKGKLQ
EADLSNALTEITAEHNSVIQTNTTESKA
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggtccagtcaggggatatttttctagccttgcttcttgtgggctgtgcagtttcattg
gaagtgcagatcattccgactcacggtgagattagtcttggagagtccaaattcttcatg
tgtgaagttgtaggcgttgccaagcacatagactggtttggaccaagtggggacaggata
gaaccgaacagaccagacataacagtgacccgtaacgatgagtcatcctccaccctcaca
ctgtacaaagctgggaaagaaaacgcagggacatacaagtgtgtcgctaccaatggagac
cagcaaggggagtcaactgtcaaagtgaaaatcttccaaaaaatcaccttcacaaacgta
ccgtcaccccaagagtttaacgaaggagacaatgccatccttgtttgtgacgtcatcagc
tcgccttcacccactgtcttctggaaatataaaggagcaaaaatacaaatggaaaaagat
gttcgctttaaggtactgagcaacaatcaccttcaaatccgtggcataaagaagacagat
gagggctcatatacctgcgagggtcgcctcatggcccgcggcgagattgatctgcgggtc
atcaaggtcgttgtgaacgtgctcccgaccatcagggtatggcagtcagaggtgaatgcc
acagcagatgtggaacagccggccatgttaacttgtgctgttgatggctatcctgaaccc
atggtgacatggacaaggaatgaagtggttctcgaggcaggagagaagtacagctttaac
gacgatggctcagaaatgacattaatggatgttaccaagctggatgaaggggaatacacc
tgcattgccaagaacaaggctggagaagccgagcaggaactcagtctcagagtgtttgtg
aaacctaagatcacatacattgtaaaccagagcacttcagagatggaggagcaggtaact
ctgacttgcgaggcatcaggagatccaactcccaccatcagctggagttccggcgatcac
gtcttcactgaaggagagcaggcacatctaaacaggatctatcaggcatcatggactcgg
cccgagcaacacaagagcctggatggaaatgtagtggtgaggagtgatgctcgtgtgtcc
tccctcactctgaagtatgtcaggtatacagatgcgggtcagtacctgtgcagagcacgc
agtgccattggagaggatgatcagtcggcatttctggaggtccgctatgcccccaagatt
cacggagcagtggcagtatatacctgggagggaaatgctgtcaatgtcagctgtgaggtc
aaagctcatcccagtgatgtatctattgtgtggctgagagacggactgcagctccccaac
tccaacaccaccaacattaagattttcagaagtccatcagccagctacctgcagataacc
cccgagtctgaaaatgattttgggagctataactgcactgcttcaaatgagatcggcaca
gagtccaaggagttcctgctcattcaggccgaggtgccatcggctccatccatcagtgaa
gtgagacccttctccaccacggcactgatccagtttgaggagccagaatccactggaggt
gttcctgtcctgcaatacagggcggagtggagggctcagggcaggggcagctgggtgcac
agggtttatgaagtccaagatggctacaccagtgaggcgactatcacagacctgaatcca
gagaccggctacgaagtgaagttgtcagccgtcaacggcaagggtgaaggtgaaagcagc
cctgctgagttcttcaagacggagcctgtccggaatcccaatcctcctaaactcgaaggg
gctcttcaacccaaaggcaactccctcaaagtccgctggatcaagcaggacgacggcggc
tcacccattttacattatctcgtccgctataaaccaatacaagtgtcggagtggaaacaa
gaaatccggctgcccagcggcagcgactacgtggttctcagtgggttggagtgggacaca
gagtacagcgtctacgtggtggcagagaatcagaagggcaagtccctgccagctaccatg
tccttcaagacgtccacacagcccgatgccatcccagatttgggtgatgaggcagcgctc
tccatgggcatcatgctctgggcagggatccttgtagtagtatttgttctcctgctgcta
gctgtcgatgtcacctgttactttgtcaacaaatgtggcctcatcatgtgcctctgcggt
aaatcgggcacagggaccaaagggcacaacgtggaggagggcaaggcagccttcatgaaa
gatgaatccaaggagccaatagtggaagtcagaacagaggacgagtgcacagccaatcac
aacgcagcaggacccacagaacccaatgaaaccacacctctcacagagccagagctggcg
gcttacactgctgctctggcactggacaccctctcctccgtagccaccaactctgacact
gccactgcaacaattgaccccgctcaggacagcccctctagcgagaccactaccctcact
tgtagtctgtctaccccagccaacgacccctcacccacccctttcctggctccggccccg
actccagagtcgaccacggcccctccgactcccctcatcttcacctccgacatcgcagct
aaaatggccccgttagtagaacagagagggagtaacaaccaggaagaaggggagaaaaaa
accactcctccctgtacccctgaacagactaaagttcaaaaatctgggacaccgatacca
ccgaagcgtaggcactctcctaaacttgcagctctgaatgctaaaggtagcccgcctgta
tctccactggctgcgtcttccgcatcatcctctcctacgcctgaaaccaagaaacctgct
ccgaggccacctgtcaacaagcttcccatacagaaacacactgtagcctcagacaccgag
atgccagcgcaaactgccgccgctctagcaaccactgccccgccaaaaccagaccctgat
tcagatacaactgcccgagatcctagtgggagtagccttactgcctttgaaactacaaat
aaacctgctgaccaaactgttgataataacactgccaaagatgctgcaactagctgtcct
tcagtgatccacggtgctcctaaagtcctggatgctgaagaatctgcccctctagttgca
gacgccccctctcctttacctgtcactcatatttcttctactccctctcatgtcgaggcg
ccgttttcaaatgatctcctcacatcgccgacagacacgtacaactttctgacccctgac
tgggggcccataggtgcagatttagagttagagctgacaaacgggacagaaagaccctct
ccgactctcgcagacctcattagcctagagagcccgccctctgacccctctctgcccaat
ggagacggagcagacctccccccctcaggcccagttctggaggcgtcagagactctggcc
aagactgctactcctgtcaacgatgagaagattttttctgatgataaaggcaaactgcag
gaggcagacttatcaaacgccctgacggagatcactgcagaacacaacagtgtcatacag
acaaataccactgagagcaaagcatga
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