Anoplopoma fimbria (sablefish): 129097783
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Entry
129097783 CDS
T09102
Symbol
rffl
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129097783 (rffl)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129097783 (rffl)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129097783 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Phage_lysis
DUF3530
PARG_cat_microb
Motif
Other DBs
NCBI-GeneID:
129097783
NCBI-ProteinID:
XP_054462675
LinkDB
All DBs
Position
1:complement(1078050..1086141)
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AA seq
351 aa
AA seq
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MFASCCNWLCLDSGVDVDPSGGAERRHQSYTNSGFNSQPSPPPAELTCKACGGRLDTPAK
KHVCVDCKKDYCSRCSAQLEPRPRLCHTCQRFYGNLLERAELMKLKVKELRDYLHLHEVS
THLCREKEELVELVIGQQSSPSDESXPETLTPDPPSVASEPPDLTPRIHILTPESPDAPP
XPPAEPPEAPAPPTETSPAEPEVQDEDQNSDPEEAPEEAPVSGRRASLSDLSCLDDIEEL
SVRQLKEILARNFVNYKGCCEKWELMERVNRLYQDQQNLLAANAVNASESGGGGGSAGQE
DNLCKICMDCPIDCVLLECGHMITCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgtcctgctgtaactggttgtgtttggactctggtgttgatgtggatccgtct
ggtggagccgagcggcgccatcagtcctacaccaactcaggcttcaacagtcagccgtct
cctcctccagctgaactcacctgtaaggcctgcggggggcgcctcgacacacctgccaag
aagcatgtgtgtgtggactgtaagaaggactactgcagccgttgctccgcccagctggag
ccccgcccccgcctctgtcacacctgtcagcgtttctacggcaacctgctggagcgggcg
gagctgatgaagctgaaagtgaaggagctgcgggactacctgcacctgcatgaggtgtcc
actcacctgtgcagagagaaggaggagctggtggagctggtcatcgggcagcagtcctcc
ccgtccgacgagtccngcccggagaccctgacccctgaccccccctctgtggcctctgag
ccccctgacctcacccctcgcatccacatcttgactcctgagtcacccgacgccccccct
ngaccccccgctgagccacctgaggccccggcaccgcccacagagacctcccccgccgag
cccgaggttcaggatgaagaccagaactcggacccggaggaggccccggaggaggccccg
gtctcgggccgccgggcctctctgtcggacctcagctgtctggacgacatcgaggagctc
agcgtccgacagctgaaggaaatcctcgccaggaactttgtcaactacaaaggctgctgt
gagaagtgggagctgatggagagagtgaaccggctgtaccaggaccagcagaacctactg
gccgccaacgctgtgaacgcctcagagtccggcggcggtggaggatctgcaggtcaggag
gacaacctctgtaagatctgtatggactgtcccatcgactgtgttctgctggagtgtggt
cacatgatcacctgcaccaagtgtggcaaacggatgagcgagtgtcccatctgccgccag
tacgtcgtccgagccgtccacgtcttccggtcctga
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