Anoplopoma fimbria (sablefish): 129097869
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Entry
129097869 CDS
T09102
Symbol
hoxb3a
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-B3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129097869 (hoxb3a)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
129097869 (hoxb3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
DUF4074
TAF1D
DUF7255
Motif
Other DBs
NCBI-GeneID:
129097869
NCBI-ProteinID:
XP_054462737
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All DBs
Position
11:complement(19369682..19424813)
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AA seq
481 aa
AA seq
DB search
MQKTTYYDNSSALFGGYSSYQVQGAAAAAAAANGFGGYDAPVPVSHHQPTFQSAAHLDVD
SYQRSACSLQSLGSNGSHQQQQQQLAKTKELNGSCMRPSQPPEHHPGSQVSPPLPPNPSN
GNTGAQQPGGGAVASSVSKSGPNKSSNSSSSISSSTSSSSSSLPPNPTVAKQIFPWMKEC
RQATKQKNCSPSNNSGNASGGAESGSSGEKSPTGGSSASSKRARTAYTSAQLVELEKEFH
FNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGLSSSSGGPSPAGSPPLT
MQSSASFLNSMHPMGGGGGYDVPSPPSFGKPHQGVSYSMSTAYSNVPMKGCPPQQKYGTP
DPDYGDPHPHHSLVQANNAGYGTPTNMQASPVYVGGGSYVEPMPGSGPSMYGLNHLGPTP
PHHQNMDYNGGPMSAPNQHHVGGGGPPGPCDQPTHPTYTELSAHHTSTQGRIQEAPKLTH
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagacaacctactacgacaactcctctgcgctcttcggcggctactcgtcctac
caggtgcagggggcggcggcggcagcggcggcggccaatggcttcgggggctacgatgca
ccggtcccagtgtcccaccaccagccgaccttccagtcggcggcccacctggacgtggat
tcgtaccagcggtcggcctgctcgttacagtcactgggcagtaacggcagccaccagcag
cagcagcagcagctcgccaagaccaaagagctgaatggcagctgcatgcggcccagccag
cctcctgagcaccacccgggctcccaggtgtcccctccgctgccccccaaccccagcaat
ggcaataccggggcccagcagccggggggcggcgccgtggcctcctctgtctccaaatca
ggccccaacaagtcatctaactcgtcctcctccatatcgtcctccacgtcatcgtcctcc
tcctcactgccccccaaccccactgtggccaagcagatctttccctggatgaaagagtgt
cgacaggcgaccaagcagaaaaactgttcgcccagcaacaactctggcaacgcatcagga
ggagctgagagcggcagcagcggggagaagagtccaaccggcggctcgtcggcgtcgtcc
aagcgggcccgcacggcgtacaccagcgcccagctggtggagctggagaaggagttccac
ttcaacaggtacctgtgccggccacgccgcgtggagatggccaacctgctcaacctgtcc
gagcgccagatcaagatctggttccagaaccggcgcatgaagtacaagaaggaccagaag
tccaagggcctgagctccagttccggggggccctcgccggccggctcccctcccctaacc
atgcagtcctctgccagcttcctcaactccatgcaccccatgggagggggaggcggctac
gacgtcccgtcccctccgtccttcggcaagccccaccagggagtgtcttactccatgtcc
actgcctactccaacgtccccatgaagggctgtcccccccaacagaagtacggcaccccg
gacccggactacggcgacccccatcctcaccacagcctagtgcaggccaacaacgccggc
tacgggactcctaccaacatgcaggccagtccagtctacgtggggggcggcagctacgtg
gagcccatgccaggctcggggccctccatgtatgggctgaatcacctcggccccacgccg
ccccaccaccaaaacatggactacaacggcgggcccatgtcagcccccaaccagcaccac
gtgggcggagggggccccccgggcccctgcgaccagcccacgcaccccacgtacaccgag
ctgtcggcgcaccacacctcgactcagggcagaatccaggaagcacccaagctcactcac
ctgtag
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