Anoplopoma fimbria (sablefish): 129097876
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Entry
129097876 CDS
T09102
Name
(RefSeq) transcription factor Sox-9-A-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129097876
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129097876
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129097876
NCBI-ProteinID:
XP_054462743
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Position
11
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AA seq
478 aa
AA seq
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MNLLDPYLKMTEEQEKCHSDAPSPSMSEDSAGSPCPSGSSSDTENTRPSDNHLLLGADYK
KEGEEEKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKSKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQNDPEDGEQTHISPTAIFKALQQADSPASSLGEVHSPGEHSGQSQGPPTPPTTPKT
DLPTSKADLKREGRPMQEGTSRQLNIDFGAVDIGELSSEVISNMGSFDVDEFDQYLPPHS
HAGVTGAAQAGYTSSYGISSSSVGHAANVGAHAWMSKQQQQHSLTTLGGGGEQGQQGQQR
TTQIKTEQLSPSHYSEQQGSPQHVTYGSFNLQHYSTSSYPSITRAQYDYSDHQGGANSYY
SHAAGQGSGLYSTFSYMSPSQRPMYTPIADTTGVPSVPQTHSPQHWEQQPIYTQLSRP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacagaagaacaggagaagtgtcactctgac
gctcccagcccgagcatgtctgaggactccgcaggctcaccgtgcccgtccgggtccagt
tcggacactgagaacacccggccgtccgacaaccacctcctcttgggtgcagactacaag
aaagagggcgaagaagaaaagttccccgtctgtatcagagatgcggtgtcccaggtgttg
aagggctacgactggactctggtacccatgcctgtgcgcgtcaacggctccagcaaaagc
aaacctcacgtcaaaagacccatgaatgcattcatggtctgggctcaagctgcacggagg
aagctggccgatcaatacccgcatctgcacaacgcggaactcagcaaaaccctgggcaaa
ctgtggagattgctcaacgaatcagagaagcgcccgtttgtggaagaagctgagcgtttg
agagtgcagcataagaaggaccaccccgactacaaatatcagccaaggcggagaaagtct
gtcaagaacgggcaaaacgaccccgaggacggcgagcaaacccacatctctccaacggcg
atcttcaaggcgctgcagcaggccgattctccagcttcaagtttgggcgaggtgcattct
cccggagagcattcaggtcagtcccagggccctccaacacccccaaccacccccaagaca
gacctccccaccagcaaagccgacctgaagcgcgagggtcgccccatgcaggagggcacc
agtcgccaacttaacatcgactttggcgctgtggacattggcgagctgagcagcgaggtc
atctccaacatggggagctttgatgtcgatgagttcgatcagtacctgccgcctcacagc
cacgctggggtgaccggagcagcccaggccggctacaccagcagctatggcatcagcagc
tcctcagtcggccatgcggccaatgtcggggcccacgcctggatgtccaagcagcagcag
caacactctctgaccaccctgggaggaggaggagagcaaggccagcagggtcaacagaga
accacccagatcaagacggagcagctgagccctagccactacagtgagcagcagggctcc
ccgcagcacgtcacctatgggtccttcaacctgcagcactacagcacctcctcttacccc
tcaatcacaagagcacagtatgactattcagaccatcagggtggtgccaactcctactac
agccatgcggctggccagggctccggcctgtactccaccttcagctacatgagccccagc
cagaggccgatgtacaccccgatcgccgacaccaccggggtgccctctgtgccgcagacc
cacagtccgcagcactgggagcagcagcccatttatacacagctctccaggccttga
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