Anoplopoma fimbria (sablefish): 129097950
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Entry
129097950 CDS
T09102
Symbol
robo1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129097950 (robo1)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
ROBO family
129097950 (robo1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
129097950
NCBI-ProteinID:
XP_054462875
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All DBs
Position
1:23977775..24107188
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AA seq
1653 aa
AA seq
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MMSPTSIGFVFLLGFLHVCSGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTP
TVEWYKDGERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAV
SHNASLEVAILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGINIDDRDER
ITIRGGKLMITNARKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVRRPGSQVVLVDQ
SVEFRCEARGDPVPTVRWRKDDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVVENMVG
KAEASATLTVHVMSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLF
SYQPPQPSSRFSVSQSGDLTITDAERSDMGYYSCQAINTAGSVLTKALLEITDVISDRPP
PVIRQGPTNQTVAVDGTVVLNCVATGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRY
AKLGDTGTYTCIASTPSGEASWKAYLEVHEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTR
TSIALSWRPNLNAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAIYLFLV
RAANAYGLSDPSPITEAVKTQDIPPTSQGVDHRQIQRELGDVLIHLHNPTILSSSSVRVQ
WTVEQQSQYIQGYKVMYRPSPEGLQRSEWAVFEVRTPGEDSAVVPQLRKGVAYEFKLRPF
FNEFQGTDSDVKIGKTLEEAPSAPPREVTVAESGDNGTAIVVSWQPPPEEEQNGVVQEYK
IWCLGNESRYHINRTVDGSALSVLIPSLAPGIRYSVEVAASTGAGPGVKSDVIIFQLDAS
GRMTDTSITENPLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSTSYA
GIRKVPSFTFTPTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSIN
CCTAGNGNSDSNLATYSRPADCIANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTF
NSPNLKDGRFVGPGGQPTPYATTQLIQSSIMGNNVDRGTGGSGGGLLGGGEMNEKHCWKP
TPVQQQKQEMASQLQYNIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRG
SSSTSGSQGQKKGVRTPKLPKQSTMNWADLLPPPPANPPPSRSTEDYSLSMEESCEPDMQ
CPMPPSHMYLQPDDLEEEEELERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPM
LQDALDSHERRRHTVSPPAPPRPLSPSHTYGYITSPLALDTDGMEEEDDDILEEEEEEGD
ETDAEVAKMHYHHTHPHTHPHHPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGS
ASEEDNVSSGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGVRVAKYPNTMGHEVGGASAR
KYQINPSSHRPGSPVSTDSNMSMAAVHRRPPKKQKQHPAAHPGNQRRDPYNEDLPPPPIP
PPAVLKSPTHPSKAVMEGRGVISPKAGEGRDKRGGTAGYRPREGSDPRNGSSERKDAQER
QKSAHGGKGNKHEGSTANKARQHAASEDILPYSRPQFPTVNSPRDPSSSSSMSSRGSGGR
RRGEGGRRNPADMGLNTTGAFQPGDDELEMVES
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctccaacttctattggatttgtatttctgttaggatttctccatgtgtgctca
ggatcccgtctgcgccaagaggacaccccaccccggatagtggagcacccatctgacttg
attgtttccaagggggagcccgccactctcaactgtaaagcggaggggcggcccaccccg
acagtggagtggtacaaggatggggagcgtgtggaaacggacagggacaatccccgttct
cagcgcatgctgctaccaagtggctccctcttctttctacgcatcgtccatggacgacgg
agcaaaccggacgaaggttcctatgtctgcgttgcccgcaactacctgggagaggcagtg
agccacaacgcctcgctggaagtagccattctacgtgatgacttcagacaaaaccctgca
gatgtgatcgtggcagcaggagagccggcggtgctggagtgtcagcctccacgtggacat
cccgaacccactatatcatggaaaaaagatggaataaacattgacgaccgagatgagaga
atcactatacgcggagggaagctgatgatcacaaatgcccgaaagagtgatgctgggaag
tatgtgtgcgtcggcacaaacatggtcggagaacgtgagagtgaagtagctgaacttaca
gtacttgagcgtcccagctttgtacgtcgcccaggcagccaggtggtgttagtggaccaa
agtgtggagttcaggtgtgaggcccgtggcgacccagttcccaccgtgcgctggaggaaa
gacgatggtgacctgcccaaaggaagatacgagattcgtgaggaccacaccctgaagatc
cgccgtctgacctcagctgatgtgggctcctacacctgcgtggtagagaacatggtgggc
aaggcggaggcatcggccacgctcaccgtccacgtcatgtctgtgcccccggcatttgtg
gtgagaccaaggaaccaggtggttggggttggcagaaccgtcaccttccagtgcgaggcc
actggaaacccacagccagccattttctggcagcgggaaggcagtcagaacctgctcttc
tcctaccaacctccgcaaccctccagccggttttctgtatctcagtctggggacctgacc
atcactgatgctgagcgctcagacatgggatactacagctgccaagccatcaacactgct
ggcagtgtcctcaccaaggctctgctagagatcactgatgttatctcggaccgcccgcca
ccagttatccgccagggcccaaccaatcagacagtagctgtggacggcacagtggtcctc
aactgtgtggcaacaggaaaccccacccccaccatcctgtggaggaaagatggtgtcttg
gtgtccacacatgactcaagggtcaaacagctggacacgggtgcattgcagatacgctat
gcaaagcttggtgacactggtacctacacctgcattgcctccacacccagtggagaggcc
tcatggaaagcctacttagaggtccacgagtttggagttccagtccagccaaacaggcct
actgacccaaacctgatccccagtgccccttccaaacctgaggtcactgatgtcacccgc
acctccatcgccctttcctggagacctaacctcaatgctggagccacacccacctcctat
ataatagaggccttcagtcatgcatcagggagcagctggcagaccttggcagagcatgtg
aaaactgagtcatttgtactgaagggcttgaagcccagtgcaatctacctcttcctagta
cgggcagccaatgcctatgggctgagtgaccccagtcctattactgaagctgtgaaaaca
caagatatccctcccacgagtcagggtgtcgaccatcgacagatccaaagggagttggga
gatgtgctcatccacctgcacaaccccaccattctctcctcctcatctgtcagggtgcag
tggacagtggagcaacagtcacagtacatccagggctacaaggtgatgtacaggccttca
ccggaggggctgcagaggagcgaatgggctgtgttcgaggtgcggacccctggggaggac
agtgctgtggtgccgcagcttcgcaagggagtcgcatacgaattcaaactccgccccttc
ttcaatgaattccagggaacagacagtgatgtcaaaattggcaagacgctggaagaagcc
cccagtgcccctcctcgtgaggttacagtggcggagagcggggacaatgggaccgccatc
gtggtctcctggcaaccccctccagaagaggaacagaatggggtggtccaggagtacaag
atttggtgcttggggaatgagagcaggtaccacatcaaccgtacagttgacggctcagcc
ctatccgtgctgattcccagcctggccccagggatccgctacagcgtggaggtagcagcc
agcaccggggcgggtcccggggtcaagagcgatgtcatcatcttccagctcgatgcatct
gggcgaatgacagacacctccatcacggagaaccccctgtcccagcagatctcagatgtg
gtcaagcagccggcctttatagcaggaataggagctgcttgctggatcatcctcatggtc
ttcagcatctggttgtacagacaccgaaagaagaggaatggcctctccaccagctatgca
ggcattcgcaaggtgccatcctttactttcacaccaacagtggcatatcagagaggagga
gaaggtgtaagcagcgctggaaggcctggtttgctaaacattggggaatctgcgactcag
ccctggcttgcagacacatggcccaactcctgctccaaccacaatgactgcagcatcaac
tgctgcactgcaggcaatggcaacagcgacagcaacttggcaacgtacagccgcccagcc
gactgcatcgccaattataacaaccagatggaaaacaagcagaccaaccttatggtgcca
gagtcaggagtctatggagacgttgacttgtccaacaagatcaatgagatgaagaccttc
aacagcccaaacctgaaagatggccgctttgtgggtccagggggccagccgacaccttac
gccaccacccaactcatccagtcctccattatgggcaacaacgttgacagaggaaccgga
gggagtggaggaggactcctgggtggaggggagatgaatgaaaagcactgctggaagccc
accccagtccagcagcagaaacaggaaatggcctcccaactgcagtacaacatcatggag
caaaacaagctgaacaaggaccgctacagaggaggtgacagccctatgccagccaccatc
ccctacaaccagacccatgacagccacactggaggctcctacaacagctccgaccgaggc
agcagtagtacctccgggagtcagggtcagaagaagggagtgcgcacccccaaactaccc
aaacagagcacaatgaattgggctgaccttttgccccctccccctgcaaacccaccccca
agtcggagcacagaggactactccctgtcgatggaagaaagctgtgaaccagacatgcag
tgccccatgcccccctctcacatgtacctgcagcctgatgatctggaggaggaagaggag
ctggagagggggcccactcctcccatccgaggggcagcatcttcccctgcagctgtatct
tacagtcaccagtccacagccactctcaccccctcaccccaggaggagatgcaaccaatg
ctccaggacgcacttgacagccatgaacgcaggcgccacactgtgagccccccagcccct
ccaaggcccctctctccttcacacacgtatgggtacatcaccagcccattggccttggac
actgatggtatggaggaggaggacgatgatatattggaggaagaggaggaggagggtgac
gagacagatgcagaggtggccaagatgcattaccaccacacccacccccacacacacccc
caccatccccagatgcaccctcgaaggttgctgctacgagggcttgaacagacgcccgcg
tccagcatgggcgacctggagagctcagtgaccggctccatgatcaacggatgggggtcc
gcttctgaagaggataatgtctcttcggggaggtccagtgccgtcagctcatcagacgga
tcattcttcactgatgctgactttgctcaagcggttgctgcagctgcagagtattcaggc
gtcagggtggccaaatatcccaacacaatgggccacgaagttggaggagcttctgcacga
aaataccaaataaacccgtcaagccaccgtcctggtagccctgtgtccacagacagtaac
atgagtatggcagctgtacacaggaggcctcctaagaagcaaaaacagcatcctgcagct
cacccggggaaccagcgacgtgatccctataatgaagatctcccacctccacccatccca
cctccagcagtgcttaagtcgccaacacacccctccaaggcagtcatggagggccgggga
gtgatttctcccaaagcgggtgagggtcgagacaagagaggaggaacggcgggttaccgg
cccagagagggctcggaccccagaaacggctcatctgaacgcaaagacgcacaagagaga
caaaagtctgctcatggagggaaagggaataaacatgagggtagcaccgccaacaaggca
cggcaacacgcagcttcagaggacattctgccctacagccgaccacagtttcccacagtc
aacagcccccgggacccaagctcttccagctccatgtcctcgaggggctcaggaggtcgg
cgaagaggagaaggaggccgcaggaaccctgcagacatgggcctcaacaccacgggggcc
ttccaaccaggagatgacgagcttgagatggtagaaagctga
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