Anoplopoma fimbria (sablefish): 129097957
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Entry
129097957 CDS
T09102
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129097957 (ubtf)
03021 Transcription machinery [BR:
afb03021
]
129097957 (ubtf)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
129097957 (ubtf)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
129097957 (ubtf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129097957
NCBI-ProteinID:
XP_054462842
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Position
11:14046230..14057026
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AA seq
810 aa
AA seq
DB search
MSPRREMVGWRERSCCALSGGRRRMRWRRGEGPSLRGLEPGTDGAVLAIVQPSPSSSTTT
PRDRYNTVQPQMNGEMEAAAQDKGGISTLWAQEDLLKLLEAMKMALPPKDLTKYKTSESH
LDWQKVAFNSYTGDMCKQKWQEVSKEIRKFRTLTELIFDAADYIKNPYKGKKIKKHPDFP
KKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYRELPEKKKKKYVEDFLRDKETF
VHSMCKFRELHPDLMESMTKKGSNAPEKPRTPQQLWYNHEKKAVLKTRPDATTKDIKDSL
GKQWTQLSDKKRLKWIAKSLEQQKLYEGVMREYIQQHPELNMTQDDIVKSTLTKAERHLK
DKSDGRPDKPPPNGYSMFCAELMSSMKDVPSTERMVMCSQRWKLLKQGEKDAYQKRCEQR
KKEFEIEMNRFLSSLSEEEQHRVLSEEKIGFKRGGANSPAAKKRASKAKANTEKPKRPIS
AMFIFSEEKRPKLQQERPDLSDSELTRLLARMWNELPDKKKEKFKRMEAILKADSEKKED
RSRLPDPPKTAQDIWQQSVIGDYLARFKSDRPKAQKAMEGTWSTMEKKEKILWIKKAAED
QKRYDRDLCEMRSPAAVIASGKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERM
TEIGSRWQRLTLKDKDRYKKIAEEKQRQYKVTLEQWLASLSSQERNTYKEYNSQKRRTTA
KPGGPKAKAKKSDTEEEEDDDEEDDDDDEREKASSEADSSSDDEDEDDDDDKEGDDDDEE
DDDEAEDKENKSEESSSDSNSQASSDSDSD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgcgtagagaaatggttggatggagagagaggagctgctgcgcgttgagtgga
gggagacggcggatgagatggaggcggggggaaggaccatctctgcggggactggagccc
gggaccgacggcgcagtgctggctatcgttcaaccctccccttcttcctccacaacgacg
ccgagagacagatacaatacagtacaaccacaaatgaatggggaaatggaggcagcggcc
caagacaaaggtgggatttcgacattgtgggcacaggaggacctcttaaaactactcgag
gccatgaaaatggccctgccgccgaaagacctgactaaatacaaaacgtcagagtcccac
ctcgactggcagaaggtggccttcaattcctacacaggagatatgtgtaagcagaagtgg
caggaggtctctaaagagattcgtaaattccggactctgacagagctgatatttgatgcc
gcagactacatcaagaacccttacaagggcaaaaagataaagaaacacccagatttcccc
aagaagcctttgactccatacttccgattcttcatggagaagagggccaaatacgcaaag
ttgcacccagagatgagcaacctagacctaactaaaatcctctccaagaagtacagggag
ctgccggagaaaaagaagaaaaagtatgttgaggacttcttacgagacaaagaaacattt
gtgcacagcatgtgcaagttcagggaactgcacccagaccttatggagagcatgaccaag
aagggttcaaatgcaccagagaagcccagaacaccccaacagctttggtacaaccatgaa
aagaaggctgtcctcaagacacgcccggatgcgaccaccaaagacattaaggacagtctg
ggcaaacagtggacgcagctgtctgacaagaagagactcaaatggatcgccaagtccctg
gagcagcagaaactgtatgagggggtaatgcgggagtacatccagcagcacccagagtta
aacatgacccaagacgatatcgtcaagtccaccctgaccaaggctgagaggcacctgaaa
gacaaatctgatggccgacccgacaaaccgcctccaaatggctactcgatgttctgtgcg
gagttgatgtcaagcatgaaggatgtgcccagcacggagcgtatggtgatgtgtagccag
cggtggaagctgctgaaacagggtgagaaggacgcctaccagaaacgctgtgaacagagg
aagaaggaatttgaaattgagatgaacagatttctcagtagtttgtcagaggaggagcaa
caccgggttttgtctgaggagaaaataggttttaagaggggcggagccaacagtcctgct
gccaaaaagcgggcctctaaagcgaaggcaaatacagagaaacctaaaaggccaatctca
gccatgttcatcttctctgaggaaaagcgcccgaagctccagcaggagcgtccggacctt
tctgacagcgagctcacacgacttctggctcgcatgtggaatgagctgccagataagaag
aaggagaagttcaaacgtatggaagcgatcctgaaggcagattcagagaagaaggaggat
cgcagccgtctgccggacccacctaagaccgcacaggacatctggcagcagagtgtcata
ggagactacctggccagatttaagagtgaccggccaaaggcacagaaagcaatggaagga
acctggagtaccatggagaaaaaagagaaaatactgtggatcaaaaaggcagcagaggac
cagaagagatacgatagagacctgtgtgagatgcgctcacctgctgctgtgatcgcctca
gggaagaagatgaagtttgagggtgaacccaagaaaccaccatcaaacggatatcagaag
ttctctcaggagatgctgtccaacggggagctcaatcacctcccgatgaaagagcgcatg
accgagatcggcagccgctggcagcggttaacgctgaaggataaggaccgctacaagaag
atcgcagaggagaagcagagacagtacaaagtcacactggaacagtggctcgctagtttg
tcttcacaagagagaaacacttacaaagaatataattcacaaaaaaggagaactacagca
aaaccaggaggtcccaaggcaaaggccaagaaatctgacacggaggaagaggaggacgac
gatgaagaggacgacgatgatgacgagcgggagaaggcttcctccgaggcagattcatcc
agcgacgatgaggatgaggacgacgacgatgataaggaaggggatgacgacgacgaggaa
gacgacgatgaggccgaagacaaggagaacaagtcggaggaaagcagcagcgactcgaat
tcacaggcgtcgtcggattccgactcggactga
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