Anoplopoma fimbria (sablefish): 129098032
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Entry
129098032 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129098032
03012 Translation factors [BR:
afb03012
]
129098032
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129098032
mRNA cycle factors
Stress granule specific factors
129098032
Translation factors [BR:
afb03012
]
Eukaryotic type
Initiation factors
eIF-4
129098032
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
PI_PP_C
RE_XamI
Motif
Other DBs
NCBI-GeneID:
129098032
NCBI-ProteinID:
XP_054462989
LinkDB
All DBs
Position
1
Genome browser
AA seq
1858 aa
AA seq
DB search
MYAGPHPPPHAELHEMNKAPQPLTGPPXNPHPAPSPGLPSFPPGQPPSVVFATPPPSQMN
PTPQPRQFAPGPRPIHQQGSFRSLQPYYTNRASLPPNSGPRGVPPNSGPRPVTPTHVYQP
GPGSQMMMIPGQQLPFPSSPQGPAYFIPGQYRSATYVATPQQYPVPAGTPGFYPGTSPAE
YGTYAGAYYPAQPQFTPTVQAAPVIMNPAPQQQQPPPQPPQHIATKRERKQIRIRDPNQG
GRDITEEIMSGGRSGSTPTPPQTTISGSEGTAVVQSNGESVPAAATPALVRPDDRGKPTP
PPPSKTPELAKGDPIPTEASSSDTNTKPPASPLPSEPEDVPLDTIPPPAPSAPVADVMDA
PSPPREATPPPQSAPEVPAYPAPLPDPVPTSAAQGKTDKKTTEAKEMEEEVKEEDAKEEE
AAVSPDTPPSTTNGIAEVEQVRPTVGLPTCHLEAPLESPIAQPEELRLPNGLPLPAPQDP
EVPAASSTERDDSPIAEPDVCEEPIVQTSTAITQAAITQAAPTAVVADTPAPVEQPAPAP
VPAPAPAPAPAPAPAPAPAPAPAVQEIPAAPVVPVAPAQPEVEDTVPPVALDIKEDTPVP
FSSTAVATEEEKPSSTVVATEEEKPSSTAVATEEEKPSSTAVATEEEKPSSTAVATEEEK
PSSTAVATEEEKPSPAETVTPADIAPETVPSPPTAEEREDTEDTPPPQAVTPALVEATMQ
AAVSVPKKKRKMKDLNKKEAVGDLLDAFKEEQVVAPPEPEPAPAVPAPETKPPTAAPPGP
EEADLTWEDKEDKEDKLDAENIQPDADSDKKYQYKTEQWKPLNAEQKKQYDREFLLGFQF
ISASMNKPEGLPAISDVVLDKANKAPLRQLDPSRLQGMSSGPDFTPSFANLGRPGMGGGG
GGGGGGGGGGGGGNRGPPPGMGMRVDGPRRSQQIQRKDLRKTFTTMSLGEDIQLNKAEKA
WKPSAKKNVRTRAAEEPEENESENAKTQELFKRVRSILNKLTPQKFQQLMKQVTELTIDT
EERLKGVIDLTFEKAISEPDFSVAYANMCRCLMGLKVETTDKPGVTVNFRKLLLNRCQKE
FEKDKDDDEIFEIKQKELEAAAVPEEKQRLMVELQDAKDKARRRSLGNIKFIGELFKLKM
LTEVIMHDCIVKLLKNHDAESLECLCRLLSTIGKDLDFEKAKPRMDQYFNQMEKIIKDKK
TSSRIRFMLQDVIDLRRNNWVSRRGDQGPKTIDQIHKDAELEEHREQMKVQQALIYKKEP
GGGGSGGRMGGGGRGGSHNPGRGSQPQDEGWNTVPISKNRPIDTSRLSKITKTPVLDFNN
QLLAPGGKGTWGSWGKGSSGGTTAKPAESGPEPGGRPTTSTLNRFSALQQSAPSTGSSQE
SDRRVPQRNSSSRERGDRFERSDRGGGGDRFDRRDDRDRNRLQITKRSFSRENEGGSRER
EQRGSADPVRRVASMTDDRGSRERARSKENVKREEAATPPPPPTPTTPALTEEELSKKST
AIIEEYLHINDMKEALQCVTEMNSTQLLFVFVRNGLESTLERSTIARENMGLLLQQLIKN
NILPKQQYYTGIQEILEVAEDMAIDIPHIWLYLAEQITPMLHEGGIPMGELFREISKPLI
PLGQAGVLLVQILTLLCKGMSHKKAGTMWREAGLRWKDFLPEDVDVNKFVTEENVEFTLG
DESEEEEKESKKKELSSAELTKQLGRLIQDKADNQRIFDWIEANLDEQQTSSNMFVRALM
TCVCQSAVVCENPNKLDGEQIKKRAKVLQKYLADEQKELQAVYALQALMVELEQPANLLR
MFFDTLYDEDVIKEEAFYKWESSKDPAEQQGKGVALKSVTAFFTWLREAEDEDESDNS
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaggtccacatccgcctccccatgcagaactccatgaaatgaataaagcacca
cagcctctaacaggaccccctnccaacccccaccctgccccctcccccggcctgccctca
ttcccccccgggcagcccccttctgttgtgtttgccaccccaccgccttcacaaatgaac
ccaacacctcaaccccgacagtttgccccagggccccgacctatacaccaacagggaagc
ttcaggtcgctacagccctactacaccaacagggccagcctgcctcccaacagcgggccc
cggggcgtccctcccaacagcggccctcgaccggtgacgcccacccacgtctaccagccg
ggccccggctctcagatgatgatgatccctgggcaacaactgcccttccccagctcgccg
caaggacccgcctacttcataccgggacagtaccggtcggcgacctacgtggccacaccc
cagcagtacccggtcccagcgggcaccccaggcttctacccaggcaccagccccgccgaa
tatggtacttatgcaggggcctactaccccgcccagcctcagttcaccccgacggtgcag
gcggcaccggtgattatgaacccggcccctcaacagcagcaaccaccacctcagcctcca
caacacatcgccaccaaacgagaacgcaaacagatcagaataagagacccaaaccaagga
ggtcgagacattacagaggagattatgtcagggggccgcagtggctctaccccaacccca
ccacagacaaccatatcgggatcagaaggtacagctgtggtccagtccaacggtgagagc
gtcccagctgctgccacaccggcactggttagaccagatgacagaggaaaacctacgccc
cctcctccatcaaagacccctgaacttgctaagggagaccccatccccacagaggcttcc
tcctctgacacgaacactaagccccctgcatcccctctaccttcagaaccagaggacgtc
cctctcgacactattccccctcctgcacccagtgctcctgttgcagacgtgatggatgct
ccgtcacctcccagagaagccaccccacccccacagtcggcgcccgaggtgcccgcctac
cctgcacccctccccgaccctgtccccacctctgctgcacaaggtaaaacagacaagaaa
accacagaggcaaaggagatggaggaggaagtgaaggaggaggacgctaaagaggaagag
gccgctgtctctccagacacacctccctccacaactaacggtattgcagaggtggagcag
gtaaggccaacagttggtttgccaacctgtcacctggaggcccctctggagtctcccatc
gcacagcccgaagagctccgcctccccaacggtctgccgctgccggcacctcaggacccc
gaggtgccagccgccagttcgacagagcgtgacgacagccccatcgccgagccagacgtc
tgcgaggagcccatcgtgcaaacctccacggccatcactcaggcagccatcactcaggca
gcgcctacggccgttgtcgcagacacacccgcccctgttgaacagcctgcacctgcacct
gtacctgcacctgcacctgcacctgcacctgcacctgcacctgcacctgcacctgcacct
gcacccgctgtccaggagattcctgccgctccggtcgtcccggtggcccccgctcaacct
gaagtcgaagacacggttccaccagtcgcccttgatatcaaagaagataccccagtgccc
ttctcttccacggcggtggccacggaggaggagaagccatcttctaccgtggtggccaca
gaggaggagaagccatcttctacggcggtggccacggaggaggagaagccatcttctacg
gcggtggccacggaagaggagaagccatcttctacggcggtggccacggaagaggagaag
ccatcttccacggcggtggccacggaagaggagaagccatctcccgcggagacggttacc
ccggctgacatcgccccagaaacagtgccctctcctcccacagcagaggagagagaggac
acagaggacacccctcctccacaggccgtcacacctgccctcgtggaagctactatgcaa
gccgctgtgtctgtgccaaagaagaagaggaagatgaaggatctgaacaaaaaggaggca
gtgggagatctactggatgcctttaaggaggagcaggttgtggctccaccagaacccgag
ccggcccctgctgtcccagcaccagagaccaagcccccaactgctgcccctcctggccca
gaggaggctgacctgacctgggaggacaaggaggacaaggaggacaagctggacgccgag
aacattcagccggatgccgactccgacaagaagtaccagtacaaaacggaacaatggaag
ccactcaacgcagagcagaagaagcagtatgacagagagtttcttctgggcttccagttc
atctcagccagcatgaacaagcccgagggtctaccagccatcagtgacgttgtcctggac
aaggctaataaggcccctctgcgtcagctggaccccagtcgtctacaaggaatgagcagt
ggccccgacttcacaccctcctttgccaaccttggcaggcctggaatgggaggaggaggt
ggtggaggtggtggtggaggaggcggaggcggaggaggcaacagaggaccacctccaggt
atgggcatgcgagtcgatggtccacgtcgctcccagcagatacagcgcaaagacctgagg
aaaactttcaccaccatgtcgctcggcgaggacatacagctgaacaaggcggagaaggcc
tggaagccgtcggccaaaaaaaatgtccgcacccgcgcggcggaggagcccgaggagaac
gagtcagagaacgctaagacccaggagctgttcaaacgggttcgcagcatcctcaacaaa
ctgaccccccaaaagtttcagcagctgatgaaacaggtgacggaactgactattgacact
gaggagagattgaaaggagtcatagatctcaccttcgagaaggccatctcagagccagac
ttttcggtggcctacgccaacatgtgccgctgccttatggggcttaaagtcgaaaccaca
gataagccgggcgtcactgtgaatttccgcaagctgctgctaaatcgatgccagaaggag
tttgaaaaggataaagatgacgacgagatctttgagatcaaacagaaagagctggaggcc
gccgcagtgcccgaggagaagcagcggctcatggttgagctacaagacgctaaagacaaa
gctaggaggcgctcgctgggaaacatcaagttcatcggcgagctgttcaagctcaaaatg
ctcacggaggtcatcatgcacgactgcatcgtgaagctgctcaaaaaccacgacgcggag
tccctggagtgcctgtgtcgactgttgtccaccatcggcaaggacctggactttgagaag
gccaagcctcgtatggaccagtacttcaatcagatggagaaaataataaaggacaagaag
acctcctccaggatccgcttcatgttgcaggatgtgatcgaccttcgacggaacaactgg
gtgtcccgacgaggcgaccagggccccaagaccatcgaccagatccacaaagacgccgag
ctggaggagcacagggagcagatgaaggtgcagcaagccctcatctacaagaaggagccg
ggtggcggcggttccggaggcaggatgggcggaggaggtcgcgggggctctcacaacccc
ggccgtggctctcaaccccaggacgagggctggaacacggtgcccatctccaagaaccga
cccatcgacacctctcgccttagcaaaatcactaagactcctgttcttgacttcaacaat
cagttgctcgcccccggtggtaaaggcacatgggggagctggggaaaaggcagcagcggt
ggcaccactgccaaacccgcagaatctggtccggagccaggcggccgtccgaccaccagc
accctgaacaggttctcagccttacagcagtcagcgccctccacgggctcctcccaggaa
tcagacagacgagttcctcagaggaacagctcgagtcgggagcgcggtgatcgcttcgaa
cgctccgaccgcggcggtggcggcgaccgcttcgacaggcgggacgaccgcgaccgaaac
cgactgcagatcaccaagcgcagcttcagtcgggagaacgagggggggagccgggagaga
gagcagcgtgggtcggccgatcccgtccgccgggtagcgagcatgacggacgaccgaggc
agcagagagcgagccaggagcaaagagaacgtaaagcgggaggaagctgcaacccctcca
cctcccccgacacccaccacgcctgccttgaccgaggaagagctgagcaagaagtccacc
gccatcatcgaggagtacctccacatcaacgacatgaaggaggctctgcagtgtgtgacg
gagatgaacagcactcagctgctgtttgtgttcgtgcgaaacggactggagtcgacgttg
gagcgcagcaccatcgccagagagaacatgggtctgctcctgcaacagctcatcaagaac
aacatcctcccaaagcagcagtactacaccgggattcaggaaatcctggaggtggctgaa
gacatggccatagacatcccccacatctggctgtacctggcagaacagatcactcccatg
ctccacgagggaggcatccccatgggagaactcttcagggagatttcaaagcctttgatc
cctctgggtcaagctggagtcctgctggtccaaatcctcactttactctgcaaaggaatg
agccataaaaaggcgggaacgatgtggagggaggccggcctccgatggaaagacttcctc
cccgaggacgtggacgtcaacaagtttgtgacagaagagaatgtggagttcactctgggt
gacgagtcggaggaggaggagaaggagagcaaaaagaaggagctgagctctgcagagctg
accaaacagctggggagactgatccaggacaaggccgacaaccagaggatctttgactgg
atcgaggccaacctggatgagcagcagacctcctccaacatgttcgtcagagctctgatg
acctgcgtctgccaatcagcagtcgtctgtgagaaccccaacaagctggacggcgagcag
atcaaaaagcgggccaaggttctgcagaaatacctggcggatgaacagaaggagcttcag
gctgtttacgccctgcaggccctgatggtggagctggagcaacctgccaatctgctgcgg
atgttctttgacaccctttacgacgaggacgtgatcaaagaggaggccttctacaagtgg
gagtccagcaaggaccccgccgagcagcagggcaagggcgtggccctgaagtccgtcacc
gccttcttcacctggctccgcgaagctgaggacgaggacgagtccgacaacagctaa
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