KEGG   Anoplopoma fimbria (sablefish): 129098044
Entry
129098044         CDS       T09102                                 
Symbol
stx1b
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    129098044 (stx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129098044 (stx1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129098044 (stx1b)
Membrane trafficking [BR:afb04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    129098044 (stx1b)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   129098044 (stx1b)
  Exosomal proteins of other body fluids (saliva and urine)
   129098044 (stx1b)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 Prominin AAA_13 Lzipper-MIP1 Dcst2 Relaxase_C GNVR Spectrin_Anc-1 TolA_bind_tri MreB-like_C MTUS1_CCDC69_CC2 CAP_N
Other DBs
NCBI-GeneID: 129098044
NCBI-ProteinID: XP_054462966
LinkDB
Position
11
AA seq 259 aa
MDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKV
RSKLKAIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNTTQSKYRDRCKDRI
QRQLEITGRTTTNEELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHTEIIKLENSI
RELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSQARKKIMIII
CCVILGVVLASTIGGTLGF
NT seq 780 nt   +upstreamnt  +downstreamnt
atggatgagttcttcgaacaggtggaggagatcagaggctgtatagaaaagctgtcggag
gatgtggagcaggtcaagaagcagcacagcgccatcctggccgcccccaaccctgacgaa
aagaccaagcaggagttggaggacctcacagctgacatcaagaagacagccaataaagtt
cgctcaaaattaaaagcaatcgagcagagcatcgagcaggaggagggtctcaacagatca
tcagcagacctcaggatccgcaagacacagcactcgacgctgtctcgtaagtttgtggag
gtgatgactgagtacaacaccacgcagtccaagtatcgcgaccgctgcaaggaccgcatc
cagagacagctggagatcactgggagaaccaccaccaacgaagaactagaggacatgttg
gagagtggcaagctggccatcttcaccgatgatatcaaaatggactctcagatgaccaag
caggctctgaacgagatcgagacccgacacaccgagatcatcaagctggaaaacagcatc
cgtgagctgcacgacatgttcgtggacatggccatgctggtggagagccagggagagatg
attgacagaattgagtacaacgtggaacactctgtggactacgtggagcgagccgtatcc
gacactaagaaggccgtcaaataccagagccaggcccgcaagaagatcatgatcatcatc
tgctgcgtcatcctcggcgtggtcctggcgtcaaccatcggcggcacgctgggcttctaa

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