Anoplopoma fimbria (sablefish): 129098179
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Entry
129098179 CDS
T09102
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129098179
03037 Cilium and associated proteins [BR:
afb03037
]
129098179
Transporters [BR:
afb02000
]
Other transporters
Pores ion channels [TC:
1
]
129098179
Cilium and associated proteins [BR:
afb03037
]
Other cilia and associated proteins
Stereociliary proteins
129098179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
129098179
NCBI-ProteinID:
XP_054463139
LinkDB
All DBs
Position
11:complement(11666858..11675607)
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AA seq
779 aa
AA seq
DB search
MAYSVNICQMDSSSESDFESIGECGPGLDTFELFGKAAASTQGHMRGDTPDGEQMTSLQR
HHWSAATLKVLSAMPSRTAGMNSAAVIPRRGRESSQPQRHQASSCSPHPSRTIQDDLEEA
DMEESSTEENKKQQLVLVLRGLSASEAMRKLRATPLSLGAKMDVRRLAFSAVAESSLMSR
NIPCYRRLSLYISRTWRHCQFSCLPVLTSIQLWHSPMKRLSGRFGTGVLSYFLFIRTLLH
FNLLLFIIFGLFLVFPQAVNPPPPPPPPPHGSHLDTFTGLELLTGMGYISQSVMFYGYYS
NTILKTCEPESPGCDKPRTMPYSIPAAYFFTIAIAFFIICIILVYSISKSFGRSLQVLKS
NGNLAVKVFCSWDFKVSKNTSVKLQSEKISTQLKELLSEMIRGEDKKSCMHRLGRVMVHL
IAWTTCLACICMGAMAVHFLSETAINQRPFKEMELLLLSAVVSGFNLLLPGFFNLCAWLE
NHDSPSVRVYVSIFRNFHHYFLRNLLLKVSIVGVLCFRWLGRIAVEPESHDLQCWESFVG
QELYRLLLMDFVFTVLYTILGEFLWRLFSKKILKRNRMPVFDIARNVLELIYGQTLTWLG
VLFAPLLPAVQIIKLFVLFYMKKSSLMLNCQASKKPWRASQMTTLFISLLCFPSFLGAAV
SVTYTIWTIKPSSNCGPFRNLTTMFQSGQLWAQELENAHPILSWLSWAYNALLENPLFLF
LASGVFLLVIYFHTQVIDGQRKVVSRLEKQIENEGKDKKFLITNLQALYERSGLVSPHR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcatacagtgtcaacatttgtcaaatggattctagttcagagtctgactttgagtcc
attggagaatgcggaccaggtctggacacctttgagctctttggaaaggcagctgccagc
acccagggtcacatgagaggtgatacacccgacggggagcagatgacctctctgcagagg
catcactggtcggctgctactttaaaggtcctctccgcaatgcccagtcgcactgctggg
atgaatagcgctgcagtgattccacgtcgtggcagagagtcatcacagccacaacgacac
caggcctcctcctgttctcctcacccctccagaacaatccaagatgaccttgaagaggca
gatatggaggaaagcagtactgaagaaaacaagaagcagcagctggtgctcgtcctcaga
ggcctctcagcgagcgaggccatgcgcaagctgcgagccacgccgctcagcctgggcgct
aagatggacgtcaggcgacttgctttcagcgccgtggcggagagttcactcatgagcaga
aatataccatgctatagacgtctaagcttgtacatatctaggacttggcgtcattgccag
ttcagctgcctccccgtcctcacatccatccagttgtggcattcacccatgaagagactg
agcgggcgcttcggaaccggggtgctttcctacttcctgttcatccgaaccctcctgcac
tttaacctccttctcttcatcatctttggcctgttcctggtcttccctcaagccgtcaac
cctcctcctcctcctcctcctcctcctcatggctctcatctcgacactttcactggcctt
gagcttctcacgggaatgggttacatctctcagagtgtgatgttttacggctactactcc
aacaccatcctcaaaacttgtgaacctgaatcaccaggttgtgacaagcccaggacaatg
ccatacagcatacctgcggcctatttctttaccatcgccatcgccttcttcattatttgc
atcatcctcgtgtacagcatatccaagtccttcgggagaagtttacaagtcctcaagtct
aatggaaacctggctgtaaaagttttctgctcctgggactttaaagtcagcaagaacaca
tctgtcaaactgcagtctgagaaaatcagcactcagctcaaagagctgctgtctgagatg
atccgtggagaagataagaagagctgcatgcatcgactcggccgcgtaatggtgcacctg
attgcgtggactacgtgtctggcctgcatctgtatgggtgccatggcagtccactttttg
tcagagactgccattaaccagaggcctttcaaagaaatggagctgctgctcttgtctgca
gtggtatccggctttaaccttttactccccggcttcttcaacctgtgtgcttggctagag
aatcatgactcacccagtgttcgcgtctatgtctccatcttcaggaattttcaccattat
ttcctcagaaacctattgttaaaggtcagtattgttggagtactgtgtttccgctggctt
gggagaattgctgtggaaccagaaagtcatgatttacagtgttgggagagctttgtgggg
caagaactgtaccgcttgctcctgatggactttgtcttcacagtgctttacactattttg
ggagagttcctgtggaggctcttctctaagaaaatactgaaaaggaacaggatgccagtg
tttgacattgctcgtaatgtgctggaactcatatacggacaaacccttacttggctcggg
gttctgtttgcgcctctgcttcctgcagtccagatcattaaactgtttgtgttattttac
atgaagaagagcagtctaatgctcaactgtcaggcttccaaaaagccctggagggccagt
cagatgacaacccttttcatctctcttttgtgcttcccctcgtttcttggcgctgctgtg
tctgtgacttacacaatttggacgattaaaccctcatcaaattgcggccccttcaggaac
ctcaccacaatgtttcagtcagggcagctgtgggcacaggagctggagaacgctcacccg
atcctgtcttggctgagctgggcctacaacgctctgctggagaacccactgttcttattc
ctcgccagtggagtctttctattggtgatatattttcacactcaagttattgatggccaa
aggaaggtcgtcagtcggttagaaaagcaaattgaaaatgagggtaaagacaaaaagttt
ctcatcaccaatttgcaagcgctttatgaacggagtggtctggtttcccctcatagataa
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