Anoplopoma fimbria (sablefish): 129098255
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Entry
129098255 CDS
T09102
Symbol
grin2aa
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04020
Calcium signaling pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129098255 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129098255 (grin2aa)
04082 Neuroactive ligand signaling
129098255 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129098255 (grin2aa)
Ion channels [BR:
afb04040
]
Ligand-gated channels
Glutamate (ionotropic)
129098255 (grin2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
129098255
NCBI-ProteinID:
XP_054463216
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All DBs
Position
11:complement(6152894..6284128)
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AA seq
1544 aa
AA seq
DB search
MKWFGSMSLSSKRCKRRSRWSSGGSNSVLLSLALVVAVTLIADPVAAQKQRTGGASDKVP
VLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIITHMCDLMSGTKIH
GVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGASIQQEAL
LMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIIILDAVEEDSRSQ
IMLKKVQSPVVLLYCSKDEAVYILEEARSLGLTGFGYIWIVPSLTTGNPDITPEAFPPGM
ISVSYDDWDYPLEARVRDGLGIITSAAAAMLEEYGDIPEAKTSCYGQMEKTSKLPPSALH
KYMMNVTWDGRDLSFTEDGYQEFPKLVVIVLNKEREWEKMGKLDNRSLTLKYPVWPRFNS
FGDAEMDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGTYIKKC
CKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTIN
EERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTAMAVFM
FEYISPLGFNRNLAQGRDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWA
FFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERNIR
KNYPAMHQYMVKYHQTGVTDALVSLKTGKLDAFIYDAAVLNYAAGRDEGCKLVTIGSGYI
FATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVD
NMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCTGTPGLLFSISRGIWSCIHGVH
IDMKKKSDLDFSPQDKMLKLIKSAKQMTNMSNLGGSHMNSPKREFMHSAGPMIMDMMAEK
GNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDANPNSVEV
AVSAESVQTNAKPPRTLWKKSVDTLRSVPPGPPPMPDMLMPDPRMSMKTQRYLPEDAAHS
DISDCSSRAASYKDPENNKHLKPKDNLKKRSVPSKYPRDCSEVELSYLKTKQVTGGANQS
GRGGGGXKIYTIDSDRELSLHSDPVHYRESRGLAADDLDYPEIYSDHSDNYRKCEQPIIH
LNSSPLHHTDSDLLPDPTYPKHYSLKEKNIVMSPHESIDRYKQTHCRSCLSKVSAGYPPG
GPYTPAVPAAASATRSPYNRCEACLHTANLYDISEDQLLADPLVSPTMHHQQQQQPDEMF
GLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKEVDQGRPARSVSLKEKDRFLDSTSD
SHYANLFGMRPYSGRLFGTGSKSMMFNHNLEESKRSKSLYPAHGSENPFLGHSLRDDTSS
RLVHGRSSSDIYKQLAVASPAAVVGAPPIKTRNDANNLRSSVKSTTSYCSRDGRIANDMY
NKEHVMPYSANKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtttggcagtatgtccctcagcagcaaaaggtgtaagaggaggagtagatgg
agcagcggtggtagcaatagcgtgctgctatccctggctctcgtggtggcggtgaccctg
atcgccgaccccgtggcggctcaaaagcagcgaactggcggcgcctcggataaagtgccg
gtcctgaacattgcggtgatccttgggcgcactcgctacatctcggacagggacatccgg
gcgctgtggagcaaggaggaccccatcgacgtcaacgtggtcacactgctggtcaacgag
accgacccgaagagcatcatcacccacatgtgcgacctgatgtccgggacaaagatccac
ggcgtggtgttcggggatggcaccgaccaggaggccatcgcccagattttggattttatt
tcctcgcagacgctcataccaatcctgggcatccacggagggtcgtccatgatcatggcc
gataaggatgtgaagtccaccttcttccagttcggtgcctccatccagcaggaggctcta
ctgatgctgaacatcatggaggagtacgactggcacatcttctccatcgtaacgtcaaag
ttccccggctaccaggagttcatcaacatcctgaaaactaccgtggacaacagttttgtg
ggctgggacctgcagaatatcatcatcctggacgcagtggaggaggacagccggtctcag
atcatgctcaagaaggtccagtccccggtggtgctgctctactgctccaaggacgaggcg
gtctacatcctggaggaggcgcgctccctgggcctcaccgggttcgggtacatctggatc
gtgccgtcgctgaccacggggaacccggatataacgcccgaggcctttccaccggggatg
atctcggtgtcgtacgacgactgggactacccgttggaggcgcgagtccgggatggcctg
gggatcataacgtcggccgcggcagccatgctggaggagtacggcgacatccccgaggcc
aagacgtcctgctacggccagatggagaagacatccaagctgccccccagtgcgctacat
aagtacatgatgaatgtgacatgggatggcagagatttgtcattcacagaagacggctac
caggaattcccaaagctggtggtcatagtcctcaacaaggagagagagtgggagaagatg
gggaaactggacaaccgcagcctgacactcaagtacccggtgtggccgcgcttcaactcc
ttcggcgatgcagagatggacgacaaccacctgtccatcgtcacgttggaggagaaaccc
tttgtcatagtggaggatgtagagaggctgaccggtacctgcatgaggaactccgtgccc
tgcaggaagcatattaaagacaacacaactgaggctggtgggacatacatcaagaagtgc
tgcaaaggcttctgcatcgatattctgaaaaagattgccaagtatgtaaagttcacctat
gacctgtacctggtaaccaatggcaagcatggcaagaagatcaacaatgtctggaatggg
atggtgggagaggtggtctataagaaagccgtcatggccgtcggatctctgacgatcaat
gaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaaaccgggatcagcgtc
atggtatcccgtagcaatggaacggtctccccgtcagcctttttagagccgttcagtgca
tcagtgtgggtgatgatgtttgtgatgctcctactggtcactgcaatggctgtctttatg
tttgagtacatcagtcctcttggatttaacagaaacctggcacaaggaagagacccccat
ggcccttccttcaccatgggtaaggccgtgtggctgctgtggggtctggtcttcaacaac
tctgtgccagtgcagaacccgaagggaaccaccagtaagttcatagtgtctgtgtgggcc
ttcttcgctgtcatcttcctggcctcttacactgccaacctggctgccttcatgatccag
gaggagtttgtcgaccaagtcaccgggctttccgacaataagtttcagaacccgtacgca
tactcgcctccgttccgcttcgggacggtaccaaacggatccacagagaggaacatcagg
aagaactaccccgctatgcaccagtacatggtaaaatatcaccaaactggagtcacggac
gcacttgtcagcctcaaaacggggaaactggacgccttcatctatgatgctgcggttttg
aactatgcggccggcagagatgagggatgtaagctggtgaccattggcagcgggtacatc
tttgccaccaccgggtacggcattgctctacagaaaggctcctactggaaacgacaggtg
gacctggctatcctggccatcatcggagatggtgaaatggaggaactagaagcccagtgg
ctgacgggaatttgccacaatgagaagaacgaggtgatgtccagtcagctagatgtggac
aacatggctggtgtcttctacatgctggccacggccatggggctctccctcatcaccttt
gtgtctgagcatctcttctactggaggcttagatactgcttcactggagtctgcaccggc
acgccgggtcttcttttctccatcagtcggggaatctggagttgcatccatggagtccac
atcgacatgaagaaaaagtcagatctggactttagcccgcaggacaaaatgcttaagctc
attaaatcagccaaacagatgactaacatgtcaaacctgggtggctcccacatgaattca
cccaaacgtgaattcatgcactcagctggtccaatgattatggacatgatggcagagaaa
ggcaacttcatctatgctgacaaccgaagctatgctcccaaagatatgatctatggggac
actggtgacctgcagtcttatcttgctaaccgccacaaagaccaccttaacaactacatc
ttccagggaggccagcatcctctgaccctgaatgatgccaatcccaactcagttgaggtg
gcagtgagtgccgagtcagtccagaccaacgccaagccgccccggactctctggaagaag
tcggtggacacacttcgttcggtgcctcctgggccgcctccgatgcctgacatgctgatg
ccggacccgcgaatgtcgatgaagacacagcgctacctccctgaggacgcagcccactct
gacatctccgactgttccagcagggcagcctcgtacaaggacccagaaaataacaagcac
ctgaagcccaaggacaacttaaaaaaaagatcggtgccatcgaaatacccaagggattgc
agtgaggtagagctgtcctacttaaagactaagcaggtcaccggtggagccaaccaaagt
gggagaggaggaggagganngaaaatttacaccatcgactcagaccgagagctgagccta
cactcagaccccgttcactaccgcgaaagtcgcggccttgctgcagatgatttggattat
cctgagatatactcagaccacagcgacaactataggaagtgtgagcagcccatcattcat
ctgaactcctcgcccttgcatcacaccgactcagatcttctacctgacccaacctaccct
aaacactacagcctgaaagagaaaaacattgtcatgtccccacatgaatcgattgaccgc
tacaaacagacacactgccgttcttgcttgtccaaagtgtctgctggctacccaccagga
gggccgtacactcctgctgtacctgctgcagcttctgccacacgctcaccctataatcgg
tgtgaagcatgcctccacacagccaacctgtatgacattagtgaggaccagctcctcgca
gaccccttggtcagtcccaccatgcaccaccaacagcagcagcaaccagacgaaatgttt
ggtctgtattggcctcagacagatgggccgcatgttcaaaaaagaaaccgcttgaggctg
agtcgtcaacactccttcgacaacatcatgctggaaaagcccaaggaggtagaccagggc
cgcccggcgcgcagcgtcagcctcaaggagaaggatcgcttcttggactccacatctgac
tcgcactacgcgaacctctttggcatgcgtccctactccggcagactgtttggcaccggg
tccaaatcaatgatgtttaaccacaacctggaggagagcaagaggagcaagtccctgtac
ccggcccatggctcggaaaaccctttcctcggccactcgctgagggatgacaccagcagc
agactggtccatgggcgtagctcctctgatatttacaaacagctggcggtggcctcacct
gcagcagtcgtcggagcgccccccatcaaaacacgcaacgacgcgaacaatctccgctct
tctgtaaaatccaccacttcatactgctcacgggacgggcggatagccaatgacatgtac
aataaagagcatgtgatgccttactcagccaataagactagtgcatacccggccccacgt
ggcgtcctaaactcagcccagttcagcaatagacgggtgtataaaaaaatccccagtctg
gagtcagatgtttag
DBGET
integrated database retrieval system
