Anoplopoma fimbria (sablefish): 129098270
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Entry
129098270 CDS
T09102
Symbol
rnf25
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129098270 (rnf25)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129098270 (rnf25)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129098270 (rnf25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RWD
zf-RING_11
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
VPS18_RING_C
Trm112p
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
129098270
NCBI-ProteinID:
XP_054463229
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All DBs
Position
11:complement(8698577..8703655)
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AA seq
474 aa
AA seq
DB search
MAECDVMSEIEVLQSIYLDELMVNRKEDGDWEVSLVLYPSTAEDSVSQFVRLTLTLTLDK
QYPSSSPAISIHNPRGLSDDKISSVQKCLQLEAQSCLGSPVLYQLIEKAKEILTESNIPH
GNCVICLYGFKEGETFSKTSCYHYFHSHCLGRYASHSERELRQREKELEEDKTRERADCQ
ELTVVCPVCREPLTYDVDQLLCSPAPQLPELDEAAIGSTFTQQWCELQKLLERQRSKGGI
IDPEVESNRFLIHTNETPPAAENENLDADVSPGPPVPSASYETGVRADQFVSGQSHCRGG
QGQRRQNQARGPRRGGRFRPQHHRRAAPVTEHLDKLSLSSDCTKGPFKTRAQGNHGQQMG
VNTELYQSKTGRGVNAEQPETLVSPDGLCQAALETECPKDATGARGPRGRRRGPYRPDSD
THGPYHWDGRASKSRGGPNNLYRGGGGGGGPRRDHDRGFQHKVVERERRGEEVL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtgcgatgtgatgtctgagatcgaggtgctgcagtcgatatatctggatgaa
ctgatggtcaacaggaaagaggacggggactgggaggtcagcctggtcctgtacccgtcc
acagcggaggactctgtctcccagtttgtccgactcaccctgactctgaccctcgataag
cagtacccctcgtcttctccagccatctccattcataacccacgggggctttctgatgac
aagatcagcagtgtccaaaagtgtcttcagttggaggctcagtcctgtctgggttcacct
gtgttgtatcagctcattgagaaagcgaaagaaatcctgactgaaagcaatattcctcat
ggaaactgtgtcatttgcctctatggctttaaggagggagaaacgttctccaagacgagc
tgctaccactacttccactcccactgcctcggccgctacgccagccactccgagagggag
ctccgccagagggagaaggagttagaggaggacaagaccagagagagagcagactgtcag
gagctgactgtggtgtgtccggtgtgtagagagcctctaacctacgatgtagatcagctt
ctctgctctcctgcccctcagctgcctgagctggacgaagcagcgattggctcaactttt
acacagcagtggtgtgaactccagaagcttctggagagacagaggtctaaaggtgggatc
attgacccggaggtggagtcaaatcgttttctcatccacaccaacgagactccacctgct
gctgaaaacgaaaacctggatgctgacgtctctcctggtccgccggttccctccgcctct
tatgaaactggagtcagagcggaccagtttgtttctggacagtcccactgcagaggaggt
cagggccagaggcgtcagaaccaggcgaggggtccgaggagaggaggcaggttcagacca
caacatcaccggagagccgcccccgtcactgagcacctggacaaactgtctctgtcctca
gactgcactaaaggaccatttaaaaccagagctcagggtaaccatggccaacagatgggg
gtaaatacagagttatatcagtctaagacaggcaggggtgtcaatgcagagcaaccagag
accctggtgtctccagatggtctgtgccaggcagccttggagactgaatgcccaaaagat
gctacaggcgctcgtggcccccgtgggaggagaaggggtccctacagacccgactcagac
acccatgggccctaccactgggacgggcgtgcttctaaaagcaggggagggcccaataac
ctgtacagaggaggaggaggaggggggggcccccgccgggatcacgacaggggcttccaa
cacaaggtggtggagagggagaggagaggagaggaggtgctatga
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integrated database retrieval system
