KEGG   Anoplopoma fimbria (sablefish): 129098443
Entry
129098443         CDS       T09102                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03266  Virion - Herpesvirus
afb04081  Hormone signaling
afb04145  Phagosome
afb04148  Efferocytosis
afb04510  Focal adhesion
afb04512  ECM-receptor interaction
afb04810  Regulation of actin cytoskeleton
afb04820  Cytoskeleton in muscle cells
afb05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    129098443
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    129098443
   04512 ECM-receptor interaction
    129098443
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129098443
   04148 Efferocytosis
    129098443
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129098443
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129098443
   04810 Regulation of actin cytoskeleton
    129098443
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129098443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129098443
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129098443
   04515 Cell adhesion molecules [BR:afb04515]
    129098443
   04090 CD molecules [BR:afb04090]
    129098443
Membrane trafficking [BR:afb04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    129098443
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129098443
Cell adhesion molecules [BR:afb04515]
 Integrins
  Integrin beta subunits
   129098443
CD molecules [BR:afb04090]
 Proteins
  129098443
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin EGF_TEN
Other DBs
NCBI-GeneID: 129098443
NCBI-ProteinID: XP_054463425
LinkDB
Position
11:complement(15111467..15123308)
AA seq 787 aa
MGTFLHRLMILYLFLLSASNVFGSDICTSQGVTTCRQCLAAHPRCAWCSQEEYGMGGSGG
SRCGLKQNLLDGGCSPAAVELPLSTLSIEKDAPLSDKASGIADDVTQIKPQKISIKLRPG
DSQRFDVSVKQVDDYPVDLYYLMDLSFSMRDDLVRLRTLGNELAVTMGRTTSKLRMGFGA
FVDKTTSPYMYTYPQEAVENPCYGIGTTCLPQFGFKNVLSLTEEVARFTEEVEKQRVSRN
RDAPEGGFDAIMQAVVCKDKIGWRPDATHLLVFTTDAETHIALDGRIAGIVQPNDGKCHL
DIENVYNKSTVLDYPSLGLMTEKMSENNINLIFAVTDYRVPLYKEYSQLIPGTHVGLLSD
DSGNVVELITDAYTKIRSKMELELLGVPEELQLSFNATCLNGEVIHGLKSCSGLKVGDTV
SFSVEAQLRSCPKEKSRTFTIKPRGFKDSLEVTVDFACDCACEENAKADSPLCSNGNGTY
ECGVCQCHQGRLGPRCECSVEDYSPSDDVNCIPKPGNPICSGRGDCLCGECSCHANEFGQ
VWGKYCECDDFNCLRFKGELCSDHGKCSCGLCQCDAGWKGENCNCSTVIDTCMSSIGLLC
SGRGHCECGVCQCTQPGAYGATCEKCPTCPDSCTIKKECVECQHFKRGQYIKDNSCNRIC
KDEIKVVDKLVLDSQNSVNCSYKDDNDCVEHFLYYEDESGKSILYVVKEPECPQGPDILV
ALLAVAGAILLLGLVGLLIWKLLVTIHDRREFARFEEERAKAKWDTGNNPLYKGATSTFT
NVAYRGN
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgggaacgtttttacaccgtctaatgatactgtatctgtttttgttatcggcatcaaac
gtcttcggttccgacatctgcacttcacaaggagtcaccacttgtcgacagtgtttggct
gcacaccctagatgtgcgtggtgctctcaggaggagtatgggatggggggatcaggtggg
tcccgctgtggcctgaagcagaatctgctggatggagggtgcagtccagctgctgtggag
ttgcccctcagcaccctgagtattgagaaggacgcaccgctcagcgacaaggcctcgggc
atagctgatgatgtcactcagataaagcctcaaaaaatcagtattaaactaagaccagga
gattcccagcgtttcgatgtgtcagtgaaacaggtggatgattacccagtggacctctac
tatctgatggatctttcattttcaatgagggatgacttggttcgccttcgcaccttgggc
aatgagcttgctgtgacgatgggccgcaccactagcaagttacgcatggggtttggagcc
tttgtggacaagaccacctccccttacatgtacacctatcctcaagaggcagtggaaaac
ccttgctatggaattggtactacatgcctgcctcaattcgggttcaagaatgtgctgtca
ctgacggaggaggtggctcgcttcactgaggaggtggagaaacagagggtgtctagaaat
agagatgctccagagggtggatttgatgctatcatgcaggctgtggtgtgcaaggacaag
attggatggcgtccggatgccacacaccttttggtattcaccactgatgccgaaactcac
atcgctctggatggacgtatagctggaattgtccagcccaatgatggaaaatgtcatctt
gatattgagaatgtttacaacaaatccactgtgctggattatccttccctgggactcatg
acagagaaaatgtctgaaaacaacatcaatttaatttttgccgtgaccgactatagggtg
ccactttacaaggagtacagtcagctcattccaggcacacacgtgggactactgtccgac
gactctgggaacgtagttgagctcattacagacgcttatactaaaattcgctctaaaatg
gagctggagctactgggagtcccagaagagttgcagctctcctttaatgccacttgcctg
aatggagaggtcatccatgggctcaagtcttgctctggcctcaaggttggagacacggtg
tcattcagtgtggaggctcagttgcgtagctgccccaaagagaagagccgcacttttacc
atcaaacctcgaggctttaaggattccttggaggtcactgtggactttgcctgtgactgc
gcatgtgaggaaaatgccaaagccgacagccccctctgtagcaacggcaacgggacctac
gagtgtggtgtgtgtcagtgtcaccagggtcgtctgggcccaagatgcgagtgctcggtg
gaggactacagtccatctgatgatgtcaactgcataccgaagccagggaacccaatttgc
agcgggagaggggactgtttgtgcggagagtgctcctgccacgcaaacgagtttggtcag
gtttggggcaaatactgcgagtgtgacgacttcaactgcttgcgcttcaaaggggaactg
tgctccgatcatggtaagtgtagctgtggcttatgtcagtgtgacgctggctggaaagga
gaaaactgtaactgtagcacagtcatagacacctgcatgtccagcattggcctgctgtgc
agcggccggggtcattgcgagtgtggggtttgtcaatgcactcagcctggtgcctacgga
gccacctgtgagaaatgccccacttgtcctgattcctgcactataaaaaaggagtgtgtt
gagtgccagcacttcaagagaggacagtacatcaaagacaacagctgcaatagaatctgc
aaagatgaaattaaagtagtggataaactggttttagattctcaaaattctgtgaattgc
tcatacaaagatgataatgactgcgtggagcacttcctgtattacgaagatgaaagtgga
aaatccattctgtatgtggtaaaagagccagagtgtcctcagggtccagacattttggtg
gcgctcttggccgtggccggagccattctgctactgggcctcgttggactgctcatctgg
aagcttctggtcaccatacatgaccgcagagagttcgccaggtttgaggaggagagagcc
aaagccaaatgggatacgggtaacaatcctttgtacaagggagccacctccaccttcacc
aatgtcgcataccggggcaactaa

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