Anoplopoma fimbria (sablefish): 129098443
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Entry
129098443 CDS
T09102
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03266
Virion - Herpesvirus
afb04081
Hormone signaling
afb04145
Phagosome
afb04148
Efferocytosis
afb04510
Focal adhesion
afb04512
ECM-receptor interaction
afb04810
Regulation of actin cytoskeleton
afb04820
Cytoskeleton in muscle cells
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
129098443
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
129098443
04512 ECM-receptor interaction
129098443
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129098443
04148 Efferocytosis
129098443
09144 Cellular community - eukaryotes
04510 Focal adhesion
129098443
09142 Cell motility
04820 Cytoskeleton in muscle cells
129098443
04810 Regulation of actin cytoskeleton
129098443
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129098443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129098443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129098443
04515 Cell adhesion molecules [BR:
afb04515
]
129098443
04090 CD molecules [BR:
afb04090
]
129098443
Membrane trafficking [BR:
afb04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129098443
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129098443
Cell adhesion molecules [BR:
afb04515
]
Integrins
Integrin beta subunits
129098443
CD molecules [BR:
afb04090
]
Proteins
129098443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
129098443
NCBI-ProteinID:
XP_054463425
LinkDB
All DBs
Position
11:complement(15111467..15123308)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFLHRLMILYLFLLSASNVFGSDICTSQGVTTCRQCLAAHPRCAWCSQEEYGMGGSGG
SRCGLKQNLLDGGCSPAAVELPLSTLSIEKDAPLSDKASGIADDVTQIKPQKISIKLRPG
DSQRFDVSVKQVDDYPVDLYYLMDLSFSMRDDLVRLRTLGNELAVTMGRTTSKLRMGFGA
FVDKTTSPYMYTYPQEAVENPCYGIGTTCLPQFGFKNVLSLTEEVARFTEEVEKQRVSRN
RDAPEGGFDAIMQAVVCKDKIGWRPDATHLLVFTTDAETHIALDGRIAGIVQPNDGKCHL
DIENVYNKSTVLDYPSLGLMTEKMSENNINLIFAVTDYRVPLYKEYSQLIPGTHVGLLSD
DSGNVVELITDAYTKIRSKMELELLGVPEELQLSFNATCLNGEVIHGLKSCSGLKVGDTV
SFSVEAQLRSCPKEKSRTFTIKPRGFKDSLEVTVDFACDCACEENAKADSPLCSNGNGTY
ECGVCQCHQGRLGPRCECSVEDYSPSDDVNCIPKPGNPICSGRGDCLCGECSCHANEFGQ
VWGKYCECDDFNCLRFKGELCSDHGKCSCGLCQCDAGWKGENCNCSTVIDTCMSSIGLLC
SGRGHCECGVCQCTQPGAYGATCEKCPTCPDSCTIKKECVECQHFKRGQYIKDNSCNRIC
KDEIKVVDKLVLDSQNSVNCSYKDDNDCVEHFLYYEDESGKSILYVVKEPECPQGPDILV
ALLAVAGAILLLGLVGLLIWKLLVTIHDRREFARFEEERAKAKWDTGNNPLYKGATSTFT
NVAYRGN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtttttacaccgtctaatgatactgtatctgtttttgttatcggcatcaaac
gtcttcggttccgacatctgcacttcacaaggagtcaccacttgtcgacagtgtttggct
gcacaccctagatgtgcgtggtgctctcaggaggagtatgggatggggggatcaggtggg
tcccgctgtggcctgaagcagaatctgctggatggagggtgcagtccagctgctgtggag
ttgcccctcagcaccctgagtattgagaaggacgcaccgctcagcgacaaggcctcgggc
atagctgatgatgtcactcagataaagcctcaaaaaatcagtattaaactaagaccagga
gattcccagcgtttcgatgtgtcagtgaaacaggtggatgattacccagtggacctctac
tatctgatggatctttcattttcaatgagggatgacttggttcgccttcgcaccttgggc
aatgagcttgctgtgacgatgggccgcaccactagcaagttacgcatggggtttggagcc
tttgtggacaagaccacctccccttacatgtacacctatcctcaagaggcagtggaaaac
ccttgctatggaattggtactacatgcctgcctcaattcgggttcaagaatgtgctgtca
ctgacggaggaggtggctcgcttcactgaggaggtggagaaacagagggtgtctagaaat
agagatgctccagagggtggatttgatgctatcatgcaggctgtggtgtgcaaggacaag
attggatggcgtccggatgccacacaccttttggtattcaccactgatgccgaaactcac
atcgctctggatggacgtatagctggaattgtccagcccaatgatggaaaatgtcatctt
gatattgagaatgtttacaacaaatccactgtgctggattatccttccctgggactcatg
acagagaaaatgtctgaaaacaacatcaatttaatttttgccgtgaccgactatagggtg
ccactttacaaggagtacagtcagctcattccaggcacacacgtgggactactgtccgac
gactctgggaacgtagttgagctcattacagacgcttatactaaaattcgctctaaaatg
gagctggagctactgggagtcccagaagagttgcagctctcctttaatgccacttgcctg
aatggagaggtcatccatgggctcaagtcttgctctggcctcaaggttggagacacggtg
tcattcagtgtggaggctcagttgcgtagctgccccaaagagaagagccgcacttttacc
atcaaacctcgaggctttaaggattccttggaggtcactgtggactttgcctgtgactgc
gcatgtgaggaaaatgccaaagccgacagccccctctgtagcaacggcaacgggacctac
gagtgtggtgtgtgtcagtgtcaccagggtcgtctgggcccaagatgcgagtgctcggtg
gaggactacagtccatctgatgatgtcaactgcataccgaagccagggaacccaatttgc
agcgggagaggggactgtttgtgcggagagtgctcctgccacgcaaacgagtttggtcag
gtttggggcaaatactgcgagtgtgacgacttcaactgcttgcgcttcaaaggggaactg
tgctccgatcatggtaagtgtagctgtggcttatgtcagtgtgacgctggctggaaagga
gaaaactgtaactgtagcacagtcatagacacctgcatgtccagcattggcctgctgtgc
agcggccggggtcattgcgagtgtggggtttgtcaatgcactcagcctggtgcctacgga
gccacctgtgagaaatgccccacttgtcctgattcctgcactataaaaaaggagtgtgtt
gagtgccagcacttcaagagaggacagtacatcaaagacaacagctgcaatagaatctgc
aaagatgaaattaaagtagtggataaactggttttagattctcaaaattctgtgaattgc
tcatacaaagatgataatgactgcgtggagcacttcctgtattacgaagatgaaagtgga
aaatccattctgtatgtggtaaaagagccagagtgtcctcagggtccagacattttggtg
gcgctcttggccgtggccggagccattctgctactgggcctcgttggactgctcatctgg
aagcttctggtcaccatacatgaccgcagagagttcgccaggtttgaggaggagagagcc
aaagccaaatgggatacgggtaacaatcctttgtacaagggagccacctccaccttcacc
aatgtcgcataccggggcaactaa
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