Anoplopoma fimbria (sablefish): 129098473
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Entry
129098473 CDS
T09102
Symbol
tcf20
Name
(RefSeq) transcription factor 20 isoform X1
KO
K24769
transcription factor 20
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129098473 (tcf20)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
129098473 (tcf20)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
129098473
NCBI-ProteinID:
XP_054463461
LinkDB
All DBs
Position
11
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AA seq
2462 aa
AA seq
DB search
MQNFSNSPVPSSLPPGFSGRGGGGTPYPPQPADPQISPRMTDDYAGMQQQSLHRGHHHPS
QASHMLAYSARNRGAVEASPTQGNIHSANTNNPYRKDAMDYYFSMGGKDRHRRGGMAYGA
GFGYPNIDGHIPHQYRHSGSGSAPASGLMSPYPVDYGSGAGSGGGAGAGAFSPSHQYNMS
QNAAMQSVPGSQMQHRQLGQTFPAVHHGQQHRNYPHSGHRMTPQYPHYSPQGGASTGSSG
MYSPPPQRYLDGAASVGFDPKVNSSPSVNASSNSLSSSVAANNVGPMENVQQSYHASNYP
GYSQQTLSLHKQAALQHRNSQHNLGVGYDNSLKMQHQGPPPGSVYAKHHQASNPSIPQTA
SHEIAKSPMHPNAQQTQINQNFSPISNPSPAASAVHSPSCSSSPSPLMGVSEVHANPSGH
GPSHPPSSNPRSSHGQGRLLQTMPQLSPTPNSNSSISSCGSSGSHKAHSMSAVGGSSHPP
TGRNKLGLGTGVGSREESSSIYSCSPLDKMQDAGLNSLNALSSQVANLPNTIQHMLLTDS
VLSQKKGKDVGQMQQATHGAPPSQPRSRNASAASSTSTVKDGSAPGIGDGASLDAGADED
SSLMSVGGSSGTKVEREEQFSEGEHGRVRQMSGASSGSEPTGYHPPSQSQTQTGQASAVK
RIASHSPSKEPNVSETKANEARIPSSLSPSFGCQSSETGPISHSTPPVSSSPSSTSSSNP
PLQPNCVSEPGLTYNDHRGGHRRTTEIKNEVIKKESEGSADKTEKVRSQTQRVGEVNSQN
CQDKENRLHTASRLHNNERGEKQESEEHQSASSVGVIVSARSEGSHTEKSKHPQGNCIEE
KHSFLRESSSHNGEEGVDLSLYSSLHQKSNFGRPQNPPQSGPHKYVYPESTYGSDLTMKS
RGRAGPASVMESNSRYLGYQQSQAGYSPVHPKDAGSVAEALVKRGQGAGAKGHEDNLQQF
PSLLQEVLQGYNLDRRYSRPEQAFPAHLQVQQQFQTRHPYGISEASAHSGQMGSTGKPPH
PNQRHGTEPSFPTDAQSKSEMSITKIMQNAEKNDMGMSQSHLTQAAGTQQPPTKHINLAD
YSLPQRKALANVSTPSSAVQELLLQEPEPLTGGNSQTESQKSSGSILAPSERRSVICDVS
PNQRGTPERDRESDREREREKSQTGASVIQQPFSSPAAASDLSKKDIGEKQVVKMETASR
EAGSENANLQTDNHGSDADMEYHSKSVHSSAVMNADPYRRGNVDITPLPSHSLSSNPLSS
PSRHQSYLHGVDLSTGSGSSFPGYRFGDTRDGNMIPRSNPHFPSHHPYHNLSPQAQSTNK
LQMYPHPRGPPHVPHDMNDWVKAMNRPSKEMMMHPGSSPGRHKVSQSEPRQRIISQTEMP
GELHATKTSLHHQSAFFDLKMWESTHSGREGARMIEGDSFYRTQPPPPLPLSAPLASHVP
IPPQMTHGLNAAEPEVPRGVAEEVKHPCPPPPPSITKPSAEMNSTQPQVQRQTKAGGSGD
TNPLILRRRVRSFISPIPAKRQLQDASQQRAATNSHHSPGAQSESSHHNEDDSSSSDIPC
PRLSSPLPGDNTYLQPLSPSSGNARAVPPRKGRGLKLEAIVQKITPNLKKPPGHVDDESN
HYPGFSHSEIPPFNDSQDQDLAHFRRVAGGDDSYMDDSHSLNDLISFRGVDETGPLPPSA
YPCDPHQTSQTLKQDFDFGLGSTVSSASGDKEDFALLGPLPPPPPLPRPVQGSPPPSSSA
LSDIQHFTNTYQQLETRRGEQSAANLLRQKLQESGIGFDDYPGSDYYGTPPHHNQGQGHM
LNRQHQMSSSRSSMSPQDSKLQDSSVPKGYFPSGKKKGRPVGSVNKQKRAQNQAQTPGQG
QPQEQAQGTTQSEPPAPLEPTTAGATTPPLVQTTSSTPPPASDPLTDNKNTPPLTPPILT
QIVKVDVESEDTQPEVEVKPVRRRRRGGKDADVSLEARGRQRRRRRGAAPTAPSMDKDDP
DTPLGGGGSQGTNRVIVDPNRKGPFFPHIHVENKVPEIGAVCTIVNGEIDSPLTSALTSQ
LSRRDRESEKRDTDEVETTLQSGKALPSSGFIVSGPVITETNHSGRLLCCLCQKWANYKH
LGDLYGPFYPAEYAAKLPKNQPQVRQCQTTTGTNKTGPTSDMSSNALCTNQDTQTQDAQF
IKPPPEPDYAISLDSNPVPLTTRVRAAPTAGGEEMMMQMTGKFSNPASFSSSSSSSSSSS
YYTSKTTSLTWDMNLDIRPIPTLKREPDLDMDKQQPQIQQQLQQPTDEAQQRPQHRKLTS
HPRFKRRHKSSEDSPRMVPSNSKASLPFQPPPPALDSLGPLAQLAQLPQMPMDPEELWVH
EGCIVWTSGVYLVNGRLYGLQEALDGARETCCSYCEMVGSTLGCYSKGCTLRYHYLCAIE
ADCSLNEDNFSLRCPKHKVKKESLPRASGQPSQCTWSSQREAERTAEEEETQESGSFWSI
ED
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttttccaatagtccggttccctcttcgctccccccggggtttagtgggagg
ggtggagggggaactccctatccccctcagccagcagacccccagatttccccaaggatg
acagatgattacgcagggatgcaacagcagagcctgcacagaggccatcaccaccccagt
caagccagccacatgcttgcttacagtgctagaaacagaggtgctgtggaggcatcgccg
acacagggtaacattcacagcgccaacactaacaacccctacaggaaggacgccatggat
tattatttctcaatgggtggaaaggacaggcacagaagggggggcatggcttatggggca
gggtttgggtaccctaacattgatggacatatacctcaccagtaccggcattctggatct
ggttctgccccagcctctggcctgatgtcaccatatccagtagactatggctccggtgct
ggttcgggtggaggtgccggtgctggagcgttctctccttctcatcagtacaatatgagt
cagaatgctgcaatgcagtcagtgcctggttctcagatgcagcaccgccagcttggacaa
accttcccagctgtccaccatggacagcagcataggaactatccacactctgggcacaga
atgacccctcagtacccacactactccccacagggtggagcatccacagggtcatcggga
atgtacagccctcctccacagagatatctcgacggggctgctagcgtggggttcgatccc
aaagtcaacagttctcccagtgtcaacgctagttcaaactctctctccagttcagttgct
gctaacaatgttgggccaatggagaatgttcagcaaagctaccatgcttcaaattatcct
ggatattcccaacagacactttcacttcacaagcaagccgccctccagcaccgcaactcg
cagcacaatttaggggtaggctatgacaactctctcaagatgcagcaccagggcccgcct
ccaggctctgtatatgctaaacatcatcaagcctccaatcccagtatacctcaaacagca
tctcatgaaatagccaaatccccaatgcatcccaatgctcaacaaacccaaattaaccaa
aactttagcccgatatccaacccctcacctgctgcctctgcagtgcattcccccagttgt
agctcctctccttcacctttgatgggcgtctcagaggtacatgcaaacccctcaggtcat
ggtccttcgcatcctccttcgtcaaacccccgtagcagccatggtcaaggtagattactg
cagaccatgccacaattaagtcccacacccaactcaaatagcagcatcagtagttgtggt
agcagtggcagtcataaagctcacagcatgagtgcagttggagggagcagtcatcctccg
acgggccgaaacaaattgggtttaggcacaggagtaggatctcgagaggaaagctcctct
atttattcatgctctccacttgacaaaatgcaggatgctggcctgaatagtcttaatgcc
ttgagctcgcaagtagccaatttgccaaacacaattcagcacatgctcctcaccgactca
gtgctttcacagaagaagggaaaggatgtggggcagatgcaacaggcaacgcatggggcg
cccccatcacaaccaagaagtcgaaatgcaagtgcagcctcaagcactagcaccgttaaa
gatggaagtgcaccagggattggtgatggcgccagtttagatgctggtgctgatgaagac
tcctcactgatgtcagttggaggctcatcagggaccaaggtggagcgtgaagagcagttt
tctgaaggggaacatgggagagtgaggcagatgagtggtgctagtagtggctctgaacca
actggctatcaccctccctctcagagtcaaacacagactgggcaagcatcagctgttaaa
agaattgcctcacattcaccgtcaaaagaaccaaatgtttcagaaacaaaagcaaatgaa
gcacgcattccctcttcattatctccatcctttggatgtcagtcatcagagactggccca
atttcacattcaacacctccagtttcctcatccccatcatccacctcctccagtaatcct
cctctgcagccaaattgtgtgtcagagcctggtctcacatacaatgaccacagaggtggc
cataggaggacgacagaaataaaaaatgaggtcatcaaaaaggaaagtgaaggctcagct
gacaaaacagagaaagtccgtagccaaacgcagcgagttggagaagtcaattcacaaaat
tgtcaggacaaagaaaaccggttgcacactgcatccagattacacaataatgagagggga
gaaaagcaagaatctgaggagcaccagagtgccagcagtgttggtgtgattgtttcagct
cggtctgagggaagtcacactgaaaaaagcaagcatccccaaggcaactgcatagaagag
aaacactctttcttaagagagtcgagcagccataatggggaggaaggtgtagatctgagt
ttatattcctcccttcaccaaaaatctaattttggacggcctcaaaatcctccccagtct
ggaccgcataaatatgtctacccagaatcaacatatggctcagatttgacaatgaaaagc
agagggagggctggcccggcgagtgtaatggaatcaaattccagatacttagggtatcaa
caatcacaggctggttacagccctgttcatccaaaagatgctggttctgtagcagaggct
ttggtaaagagagggcaaggagcaggggctaaaggtcatgaggataatttgcagcaattc
ccaagccttttacaagaggttcttcaaggttacaatttagatagacgttatagcagacca
gagcaggcctttccggcccatctccaagtacaacaacagtttcaaaccagacacccgtac
ggcatatctgaggcttcggctcattctggacaaatggggagcactggaaagcctccacat
ccaaaccagaggcatggaacggagcctagtttccccacagatgctcagtccaaatcagaa
atgtctattactaagataatgcaaaatgctgagaaaaatgacatgggcatgtcccagagc
catttaacacaggcggcggggactcagcaacccccaacaaaacatataaacttagctgat
tattccctaccacagagaaaagccttagctaatgtgtccaccccgtcctctgctgtgcag
gagctccttttgcaagagccagagccgctaacaggcggcaatagtcaaactgagtctcaa
aaatcatcaggctccatattagccccatcagagcggcgctctgtcatatgtgatgtgtcg
ccaaaccaacgcggcacaccagagagggacagggaaagtgacagagagagagagcgggag
aaaagtcagactggagcctctgtgattcaacagccattttcctctccagcagcagccagt
gatctgagtaaaaaggatattggagagaaacaagtggtgaaaatggaaacggcatcaaga
gaggctggctcagagaacgcaaatttacagactgataaccatggcagtgatgctgatatg
gagtatcattccaagtctgttcactcatctgctgtgatgaatgctgacccctataggcga
gggaatgttgatattacacccttgccttctcattctttgagctccaaccctttatcttca
ccttcaaggcatcagtcctatcttcatggtgttgatttgtcaactggcagtggcagcagt
tttcctggatatcgatttggagatacaagagatgggaatatgataccacgcagtaacccc
cattttccctcccaccatccgtaccacaatttatccccccaggcacagtccaccaataag
cttcaaatgtatcctcaccctcgtgggccccctcatgtccctcatgacatgaatgactgg
gtaaaagcaatgaacaggccatcaaaggagatgatgatgcatcctggttcttctccagga
agacataaggtcagccaatcagagccgaggcagaggattatctcacaaactgaaatgcct
ggtgagctacacgcaaccaaaacttcactccatcatcaaagcgctttctttgatttgaaa
atgtgggagtcgacacactctggaagagaaggcgctaggatgatagagggagactccttc
tacagaacacaaccgcctcctccgctccctctttctgctcctctagcttcacacgtcccc
attccaccacaaatgactcatggcctgaatgctgctgaacctgaggtcccaagaggagtc
gcagaggaagtcaaacatccctgcccacctcctccacccagcatcactaagccctctgct
gagatgaactccacacagccacaggtgcagcgtcagactaaagccgggggttctggagac
acaaatccgctcatattgcgaaggagggttcgttcttttatctctcctattcccgccaaa
aggcaactccaggatgcgtctcagcagagagctgccacaaattcacatcactcccctggg
gctcagtctgagtctagccatcacaatgaagatgactcatccagttcagatatcccatgt
cccaggctctcttcccctcttcctggagataatacctatttacaacctctatctccatca
agtggtaatgccagggctgtgcctcccaggaaaggacgaggtttgaaactggaggcaata
gtccagaaaatcacaccaaatctaaaaaagccaccaggccatgttgatgatgagtcaaat
cattacccaggcttctcccactcagaaataccaccgtttaatgattcacaggaccaagac
ttggcacatttccgtagggttgcaggaggggatgatagttacatggatgacagtcattca
ttaaacgacttgatttccttcagaggagttgatgagaccgggcctttacctccgtctgcc
tacccatgtgatcctcatcagacgtcccaaaccctaaaacaagactttgactttggatta
ggatccactgtttcatcggcatctggtgacaaggaggattttgctttgcttggaccttta
ccccctcctccaccgcttcctcgcccagtccagggttccccacctccatcttcatcagcc
ctgtccgacattcaacatttcaccaacacttaccagcagcttgagacaagaagaggagag
cagtcggcggctaaccttcttcggcagaaacttcaagagtctggcattggatttgatgat
tatcctggcagtgactactatggcaccccaccccaccataaccagggtcaaggacacatg
ctgaataggcaacatcagatgtcctctagtaggtccagcatgtcgccacaagattctaag
ctacaagacagttcagtgcctaaaggctatttcccatctggcaaaaagaaggggaggcca
gtaggaagtgtgaataaacaaaaaagggcccagaaccaagcccaaacaccggggcagggt
cagccccaagaacaggcccagggcacaactcagagcgaacccccagccccactagagcca
actacagctggtgccacaaccccgccgttggtgcagacaacgagcagcacaccaccccct
gcatcagaccctctgaccgacaataaaaacactcccccactgaccccgcccattttaacc
cagatagtgaaagtggatgttgagagcgaggacacacagccagaggttgaagtcaaaccg
gtgcgaaggagacgcagaggtggaaaagatgcggatgtgtcgctggaggcaagaggacga
cagaggaggagaaggagaggagcagcaccgacggcaccatcgatggacaaagacgaccca
gatacacctttagggggaggagggagccagggcacaaatagagtaattgtggatccaaat
agaaagggcccgttttttccgcacatacatgtggagaacaaagtaccagagatcggggca
gtgtgcaccattgttaacggtgagattgattctcccctgacctcagctctgacctcccag
ttatctaggagagacagagaatcggagaaaagggacaccgacgaggtggagactacactt
cagtcgggaaaagcactcccttcatctggctttattgtttcaggccccgtgattacagag
accaatcactctggccgcctgctctgctgcctgtgtcagaaatgggcaaattacaaacat
ctcggagatctctatgggcctttctatccagctgaatatgccgcaaagctccccaagaac
cagccccaggtccgacaatgtcaaacgaccacaggcacaaacaaaacgggaccaacctca
gacatgagctcaaatgctctgtgcaccaaccaagacacacaaacacaagatgctcagttt
atcaagcccccacctgagcccgactatgccatcagcctagattcaaacccagtacctctc
accactagagtcagagcggcaccaacagctggtggagaggaaatgatgatgcaaatgacc
ggcaagttcagtaaccccgcctcattttcctcctcctcttcgtcctcttcgtcctcctcg
tactacaccagtaaaacaacgtctctgacctgggacatgaatctagacatccggcctatc
ccgacgcttaagagagagccagaccttgatatggacaagcaacagccgcaaatccagcag
cagctgcagcagccaacagacgaagctcaacagcgaccccagcacagaaagctgacctca
cacccccgcttcaaaaggaggcacaaatccagtgaggattcccccagaatggtgccatcc
aacagtaaggcctccttgcccttccagccccctccgcccgccctggactccctgggaccc
ttggcccaactcgcccagctccctcagatgcccatggacccagaggagctgtgggtccat
gaaggatgcatagtgtggaccagtggggtgtatcttgtcaacgggagactgtatggcctg
caggaggcactagatggcgccagagaaacatgctgctcgtactgtgagatggttggctca
accctgggctgctacagcaaaggctgtacactccgctaccattacctgtgcgctattgaa
gcagattgctctctgaacgaagacaacttctcactgcggtgtccgaagcacaaggtaaag
aaggagagtttacccagagcatccggccagccaagtcagtgtacctggagcagtcagaga
gaggctgagagaaccgcagaagaagaagagacacaggagtctgggagcttttggtcaata
gaagactga
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integrated database retrieval system
