Anoplopoma fimbria (sablefish): 129098516
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Entry
129098516 CDS
T09102
Symbol
gtf2f1
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129098516 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129098516 (gtf2f1)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
129098516 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
129098516
NCBI-ProteinID:
XP_054463500
LinkDB
All DBs
Position
11:2094634..2100663
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AA seq
531 aa
AA seq
DB search
MTSLGSSSSSSTEYTVRVPKNTSKKYNIMAFNSGDRVNCSAWTQARMERDMSARRIYGEE
ETGDGAAGSEFGKKQREEARRKKYGIVTREFKVEDQPWILKVNGKAGKRFKGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGCDDDEDENEKSGKKKEGGGRGGDLRIHDLEDDLEMSSNDSDSSMGDDGESKT
KAKKDTGKGKAKKKKRKSSDKEAMEDSDDGDYEGLEVDYMSDESSSDEEPEKGKPSKGED
HPKGIDEASESEEESEEEKQNEEEAKEEEEEDDGKKTPVQAEKKKKKDSSGESETSDDSD
IEGETASALFMKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQGKR
PTPGPSTDSPAAKRLKMEPSSQSPAPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYLIRK
PMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactggggagcagcagttcctcatccacagaatacacggtgcgagtcccaaaa
aacaccagcaagaagtacaacatcatggctttcaactcaggggacagagtcaactgttca
gcctggacacaggctcgtatggaaagagacatgagtgcccgacggatatatggggaggaa
gagacgggggatggcgcggctggcagtgagtttggcaaaaagcagcgtgaggaagcgcgc
aggaagaagtatggtattgtgacacgagagttcaaagtggaggatcagccctggatcctc
aaagtcaacggcaaggccggcaagaggttcaaaggtctaaagaagggcggtgttacagaa
aatgcgtcctactacatctttacacagtgtcctgatggagcttttgaggccttccctgtc
cacggctggtacaactttacaccgcaggcaaagcacagaactctcactgctgaggaggct
gaggaggagtggggcagaagaaacaaggtggtgaatcacttcagcatcatgcttcagagg
cgtttccgggagcaggagcgtggttgtgatgacgatgaagatgagaatgagaagtctggg
aagaagaaagaagggggtgggcgggggggagatctgcgcattcacgacctggaggacgac
ctggagatgagcagcaatgacagtgacagcagtatgggggacgatggagagagtaagaca
aaggcgaagaaagacacggggaaaggaaaagcaaagaagaagaagagaaagagcagcgac
aaagaggccatggaggacagcgatgacggtgactacgagggtctagaggtggattacatg
tcagacgaaagcagttcagacgaagagccagaaaaaggaaagcccagcaaaggagaggac
catcccaaagggatcgatgaggcgtctgaaagtgaggaagagagcgaggaggagaaacag
aacgaagaggaagcaaaagaggaagaggaggaagacgatggaaagaaaacgccggtccaa
gcggaaaagaagaagaaaaaagacagcagcggcgagtcggaaacctcagacgacagtgac
atcgagggagagaccgcctccgctctgttcatgaagaagcgcacgcctcctaaacgtgga
ggacgtggctctgcaggcagctccaggaccggcagtcgccccgggacaccatccatagac
tccgcctccacctccaacacactccgcgctgctgccagcaagctggagcaaggtaagaga
ccgactccgggtcctagcactgactcgccagccgccaaacggctcaaaatggagcccagc
agtcagagcccggctccctctgggaagagtacgcctcaacccccatcaggcaaatccact
cctagctccagtgatgtgcagctaacagaggaagcagtccggcgatacctgatccgtaaa
ccgatgaccaccaaagacctgctgaagaagttccagaccaagcgcacgggtttgagcagt
gagcagaccgtcaacgtgctggcacagatcctgaagcgcctcaacccggagcgcaagaac
gtaaacgacaaaatgcacttctacctcactgaataa
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