Anoplopoma fimbria (sablefish): 129098524
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Entry
129098524 CDS
T09102
Symbol
rangap1a
Name
(RefSeq) LOW QUALITY PROTEIN: ran GTPase-activating protein 1a
KO
K14319
Ran GTPase-activating protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129098524 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129098524 (rangap1a)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129098524 (rangap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
SDA1_dom
MctB
CDC45
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
129098524
NCBI-ProteinID:
XP_054463514
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All DBs
Position
11:23624063..23633255
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AA seq
575 aa
AA seq
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MATDSVAELADSLAKTRVEDGELSYKGQGRKLDDAQSVEEMVKEIQDFDDLQALRLEGNT
VGVEAAQAIAKALETKSKFKRCYWSDMFTGRLRSEIPAALNALGDALMLAGARLTVLDLS
DNAFGPDGVKGIEKLLKSKACYTLQELRLNNCGMGIGGGKILAAALTQCHKKSSAEGXPL
GLKVFVAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINHPGVTALAKAMQHNASLRI
LNLNDNTFTEKGAIAMAQALKHLRSIQVINFGDCLVRPAGAIAIAEAVSEGLPILKELNL
SFGEITEEAALTVAQAVKNRDQLEKLDLNGNCLGEDGCKALKDAMEAMSIAELLGSLSDD
EGEPGDDDEDDDDEEEDEDDEDVDEEEIEEEEEEEEEEESNGNQLSTPESASRPPDVSSF
LSFPSPDKLLKLGAKRAMLIEQQVDVSDATKTAEAFLKIASVYKEENNDVKNAVLESIDA
LLKKAFATPSFQGYNFVSSLLVLLGLLKSEDKVKPVLVVPGHLNALEHVVRQDYFPKENV
AVLQAFLSRNNKALESCGNARNSLQSTLQRVRSEG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatagtgttgcagagttggccgactctctggctaagaccagagtagaggat
ggagagttgagctataaaggccagggaagaaagctggatgatgcccaatcagtggaggag
atggtcaaggaaatccaggacttcgatgacttacaggctctgaggttggagggaaacact
gtaggcgtggaggcagcacaggccatcgccaaggccctggagacaaagagcaagttcaag
cgctgttattggagtgacatgttcacaggtcgcctgcgctctgagatcccagctgccttg
aatgcactgggtgacgctctgatgctggccggtgcgaggctgaccgttttagacctcagt
gacaacgcgtttggaccagatggggtgaagggcatcgagaagttgctcaaaagcaaggca
tgctacacattgcaggagttacggctcaacaactgtggcatgggcatcggaggggggaag
atcttggctgctgctttgacccagtgccataaaaaatccagtgcggagggtngccccctc
ggcctgaaggtgtttgttgcggggaggaaccgcctggagaacgacggcgccacagccctc
gctcaagccttccagttgatgggcagcctggaggaagttcacatgcctcagaatggcatc
aatcaccctggtgtgacagctttggctaaagccatgcagcacaacgcaagcctccgcatc
ctcaacctcaacgacaacaccttcactgagaagggggccatcgccatggctcaggccctg
aaacacctccgcagcatccaggtgataaactttggagactgtctggtgcggccagcagga
gccatagctattgcagaagctgtatcagagggactaccaatcctaaaggaactcaatctg
tcatttggcgagattacagaggaggcagctctgactgtggcacaagcagtaaagaacagg
gaccagctggagaaactggatctaaatggtaactgtctaggagaggatggctgcaaagct
ctgaaagacgccatggaagccatgagcattgccgagcttctaggatcacttagtgacgac
gagggcgagccaggcgatgatgacgaggacgatgatgatgaggaagaagatgaagacgac
gaggatgtggatgaggaggaaatagaggaggaagaggaagaagaggaggaagaggaaagc
aatggcaaccagttgtccacccctgaatcagcatcccggccgccagacgtctcctccttc
ctcagctttccgtcccctgacaaactgctcaaactgggggccaagagagcgatgctgatc
gagcagcaggtggatgtgtcagatgctacaaaaacagctgaagccttcctcaagattgcg
tctgtgtacaaggaggagaataatgatgttaagaatgcagtgttggagagcattgatgct
cttctgaagaaagcctttgccactccgtctttccaaggctacaactttgtatcatctttg
ttagtgctgcttggacttctgaagagcgaggacaaggtaaagcctgtgctcgtggttccc
ggccacctcaacgccttggagcacgttgttagacaggactacttccccaaagagaacgtg
gccgtgctgcaggccttcctgtcccgaaacaacaaggctctggagtcatgtggcaacgcc
agaaacagcctccagtcaacactgcagagagtccgatctgagggctga
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