Anoplopoma fimbria (sablefish): 129098589
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Entry
129098589 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129098589
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
129098589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
129098589
NCBI-ProteinID:
XP_054463611
LinkDB
All DBs
Position
11:9466187..9477388
Genome browser
AA seq
2341 aa
AA seq
DB search
MQDGXTSGSTALTLTIFLSFLSPPLSLPSEPLTPLPPFLSHLTSPSQLWLQTEGDMQSFR
ERSGGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPSPHPGPGPGHSRTGYEAH
SLANPTSMPPAGGPGTGGGPKDCYSQQAYPGYPGNGGGNGSGNGGSAPSQAKKAYRGSKV
APPNPSQHLQGPGGYSNHMGPGSYSAQYLSEGHLQQKWEDSAQIAQYDQEMVGRIEAGGT
PATGTSQYMEQNMLGHTQTQCHQPTTPAYTSPHHHPHXPNPAPSPLMYPQSHLHYPQHSP
SPSPYMEKCSPMPHCYKGYNIPPNSQYGRQMSSHSNLKQGSYRPTPNSYGYQQPPSRGYE
QQPPLQAMANPQEPHPKYQHYSQPQQNYCLSELSVRSPEQYYQTCSPSSSHSPARSVGRS
PSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSAGMQEQASTNTMLMPPRSHPSPNV
PHAAPHSYTATPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSEALVAN
KKSGKRSSGGSNSSAGSGASIKKGEEYKSPTYPDGGGGGSVGGGPMQDPYATPQHQPMPM
DLHEGGYSSSSDEQLERGYYYCGQGRSPAQAPNNTQLSLDTASSCSMTSPDDMSTRSGDS
GLHNLTPDPSRCQSGQRGDGMNTPVKSIGDERSPTSITIPSPMKQERDSPSDIQHINEPV
KENFEESAWTEKSADKEEVSIDKTLDSERDSDTTKSTENLEKWSDEEKCPALYGKVNKGM
TDKSYCYKDTVYQTVQSKYDPDTRDSVEQSPAALSDSSHKEHFGHEIKSEAFKSESPTAS
ESSVKTLPFISRGDLEQDQYSTEKEDSSENTSPTPQIEALDESNSDKRESRDEEDEEEGE
EDEGTQDEADEEEEGEIQEQQHSLSSPLSVEVREELEEGERVSSTEDHMNNRDGQEKPPG
DLRSRTESTELHIDNEPAGAPAHPNAAAATAAADASARESAIGDTAPQPQSAMPVFSALN
DKTTPPAQARDHIDHSADKVLEPDSPQLPGKSILPSAPSWADTPPSPKKGDEDMEPGISC
SSAVTPLAKPEPVAPSAQPRAFGRKHARGRRRIMHSGVGIRRQLGLEREGEKEEEGAPSP
SQKPCIPPSKTVLFSDQMDLAHQESIVSQTPKMLTDAFRSRMCTRSFNAPDLPPKVEPHV
KRKPGPKPGPKPGLKLGPKPGPKPGPKTGAKSGPKPGPKPGLKTGPKPGPKPGSKSGPKP
GLKPVLNEPELPQKVETPVKRKPGPKPGSKTGSKPGPKPGPKPALKAGPKPGPKPGPKPA
DVLPPDDTAPIRASVGRPKGSVSKAKLVQQEEPIQPLTGLQSRARKSPKASLSQVTQDVK
PVNQDEKQVNHEVKVPEKEGKNMVLRSRKPSQEKLSKEKVTGEDILPQTLTEIKATDDFP
KVEEPITEEKTPTSISNAVKNTDDPADPPEPLATPVLMEQSEEKTLLSLKRKLGPELSTA
PVKKKRGPKPKPKPLPPQPPLLEQVVSTPKDKAVRGPRRKRGPPKKVSVVSPAPKDTHPN
ITEMDIASDVPVVPPQCPTKTKVLPPRKGRGQKYEAMVQKIASPSSKKHLPIPQMDSSLT
DDVTSRALPQLVLKEGETSMLINNIEVIEGEVKSIDSRQEVLKHEGTVRKKEMAQEKETC
EVSQKTSTAQEVRQGMEEEIMNKEEKREKHINPGKQQDVSADKAWSSIEAPVKVGSPGEW
IQQASEGVSSAPTKSSRTKRKRWAMVESTDASVVALEAGSLIVTTPRLAKQRAIKNNHEM
HLKQRRKKRKGQAPVDEETVEDKNIETVEQQQEKVEETITPTESTITLPISADEITEAPQ
VTSTELIQKPRRGRKPSANPTQRKRGKASSEQVPGKPMKVHKKPGPKPGMKDAMEVIEAV
VRAAGCEGAEKEEREKDEMERREREKEEKAETCTVGPVVTLSEKQTEILSVKRIRRRPVH
QNSKLSFCPYVRINNSRDFSSWCAIVNKPEDAVVFQRRRKKGILRMRNPFTVAKVVPHTA
AMLQGPLVKRDLIDRCLTCCLCGKPANYRDLGDLCGPYYTEDGVPRKMLTIGHTESVREE
SQKTNDNNSGSSEEPSNSSKDEGEGSTEKVANAEASTQEGSSSRHHWHYRRAERTERMGQ
EGGPRRLTLRERFRRMKQLQAISTGASSDQEGGDSMFRRLQVEAEAKEHWAHENCAIWTK
GVIMIAGRLYGLREAANNSAKTSCYKCQIVGASLSCCWRGCSHKYHYVCAKEIGCTFHED
DFSIKCPKHESLFSFSTGPVRYSFTTSTTNTTTSQPSKHHLSGKANKDAVLTATYTQKTR
R
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatggatgaacctcaggctcaacagcactaaccctcacaatttttctctctttt
ctctcgccccctctctccctgccttcagaacccctaaccccccttccccctttcctgtct
cacctcacctccccctcccagctctggctgcagacggagggagatatgcagtccttccgt
gagcgcagcggtggttaccacagcaaccaaccctgctaccagcaggagccccatgaatta
tcccgcctggagacctaccgacaacacccgcatcatccccacccccagcacccgcaccca
ggccccagtccacatccaggcccaggcccggggcacagcagaacaggctatgaggctcat
tcactggcgaaccccacgagcatgcctccagctggaggaccgggaactggaggaggaccc
aaggactgttacagccagcaagcttaccctggttacccaggcaacggtggagggaacggg
agtggaaatggaggctctgctccctcacaggcaaagaaagcttacagaggaagcaaagtg
gccccaccaaaccccagtcagcacctccagggtccagggggctacagtaaccacatgggc
cctgggagttactcagcccagtatttaagcgagggccacctccagcagaaatgggaggac
tcggcccagatagcacagtatgaccaggagatggtggggcgtatagaggctggtgggacc
cctgcaactggcacctcccagtacatggagcagaacatgctgggtcacacccagacccag
tgccaccagcccaccacccctgcctataccagcccccaccatcacccccacncccctaac
cctgccccctcccctctcatgtacccccagagtcaccttcactacccccagcactcaccc
tctccttcgccatatatggaaaagtgcagccctatgccccactgctataaaggctacaac
attcccccaaattcacagtatggcagacaaatgagcagccacagcaatctgaagcagggg
agttacaggccgaccccgaacagttatggctaccagcagcctccctccagaggttatgag
cagcagccccctttacaggccatggccaacccccaggagccccaccctaaataccaacac
tacagccaaccccaacaaaactactgtctctcagagctgtctgtcagatcaccagaacag
tattatcagacttgtagcccctcctcaagccattccccagcacgctctgtaggacgctcc
ccctcgtatagctccaccccttcaccactaatgaccaatccagagtcattccagtatggc
caacctcccatgacccctggagcagcctcctcctcttcatcctcttcagctggcatgcag
gagcaagcaagtaccaataccatgttgatgcccccacgctcacacccctcacccaatgtg
ccccatgcagccccccacagctacaccgccacgccgcaggtccccaccatgaaagaacgc
ttctcagagaagctgttgtcaaaccccagtttgtggagcctgaacgccctcacctctcag
gtagagaacatctctaataatgtccagcagttgctgctttcagaggccctggtggccaac
aagaaaagcggtaagcgcagcagtggagggagcaacagcagtgctggaagtggagcatcc
atcaaaaagggtgaggagtacaaaagtcctacatatccagatggtggtggtggtggtagt
gttggtggaggccccatgcaggacccttacgctaccccacagcaccagccaatgcccatg
gacctccatgagggaggctactccagcagtagtgatgaacaactggagaggggttactac
tactgtggccagggcagaagtccagcacaggctcccaataacacacaactcagcctggac
acagcctcctcatgctccatgacatctcctgatgatatgtccaccaggtctggagactca
ggtctgcacaaccttacccctgatcctagtagatgtcagtcagggcagagaggggatggc
atgaatacgccagtgaagagcattggcgatgagaggtctcctacaagcattacaatcccc
agtcctatgaaacaagaaagggactccccttcagatatacagcatatcaacgagcctgtc
aaagagaactttgaagaatcagcctggacagaaaaatcagctgacaaagaggaggtgtca
atagataaaactcttgacagcgaaagagattcagacacaactaaatctacagagaatctg
gagaaatggtcagatgaagagaaatgtccagctctctacggcaaagtaaacaaaggaatg
acagacaaaagctattgctacaaggacacagtgtaccaaacggtccagagcaaatatgac
cctgatacaagagactcagttgaacagtccccagcagctctctctgactccagccacaag
gaacactttggccatgagataaaatcagaggcgttcaaatctgagtctccaactgcctct
gagagctcagtgaaaacattgcctttcatttctcggggtgaccttgaacaggatcaatat
tccacagagaaggaggacagctcagagaacacctctccaaccccccaaattgaggccttg
gatgagagcaactcagacaagagagagagcagagatgaagaggatgaagaggagggggaa
gaggatgagggtacacaggatgaggcagatgaagaggaagaaggagaaatacaggaacaa
caacattctctttcctctcctctgtctgtagaggttagggaggaactggaggagggagag
agagtgtcatcgactgaggatcacatgaataacagagatgggcaagagaagcctcctggg
gatctccgcagcaggacagagagtacagaactccatattgacaacgagcctgcaggggcg
cctgcccatccgaatgcagcagcagcaacagcagcagcagatgcttctgcaagggagtca
gccattggtgacaccgctcctcagcctcagtctgctatgccagtcttctcagctctcaat
gacaagacaacacctccagctcaggccagggatcatattgatcacagtgctgataaagtg
ctggagccagactctcctcagctgccagggaagtcgatacttccctcagccccctcctgg
gcagacactcctccctcacccaaaaaaggtgatgaagacatggagccaggcatcagctgc
tccagtgctgtgacccctttggcaaagccagaacctgtggccccatctgctcagccgagg
gcatttggacgtaagcatgcaaggggcagaagaagaatcatgcattccggtgtggggatc
aggcgacagctaggcttggagagggagggggaaaaggaggaggaaggagccccctcgcct
tcacagaaaccctgcatacctccaagcaaaaccgtgttgttctcggatcaaatggaccta
gctcatcaggaatctattgtgagccagactcccaaaatgcttactgatgcttttcgttcg
agaatgtgcacccgctcattcaatgcaccagacttgccacccaaagtcgagcctcatgtg
aagagaaaaccaggcccaaaaccaggtccaaagcctgggctcaaactagggccaaaacct
ggaccaaaaccaggaccaaaaacgggagcaaagtcaggtccaaaaccagggcctaaacct
ggtcttaagactggaccaaagcccgggccaaaacctggatctaaatcaggaccaaaacca
ggactaaaaccagtgctaaatgaaccagagctcccccagaaagttgaaacacctgtgaaa
cgaaaaccaggacctaaaccaggttcaaaaactgggtcaaaacctgggccaaaacctggt
ccaaagccagctctaaaggcaggtccaaaaccaggacctaagcctggacccaagcccgca
gatgttttgccccctgatgacacggcacccatcagggcctcagtgggtcgccctaaaggc
tcagtttctaaggcaaagctggtacaacaagaggaacccattcaacctctgacaggactg
caaagcagggccaggaagagcccaaaagcttcactatcacaagtaacccaggatgttaaa
ccagtgaaccaggacgaaaaacaagtgaaccatgaggttaaggtgccagagaaggagggt
aagaacatggtcttaagatccagaaagccctcgcaagaaaaactgtcaaaagaaaaagtc
acaggggaagatattcttccccagacgctaacagaaattaaagctaccgatgattttcca
aaagtagaggaacctattactgaggaaaaaactccaacttccatttctaatgcagtcaaa
aacacagatgatccagcagacccacctgaaccacttgccacaccagtcttaatggaacaa
tctgaagaaaagacattactttcattaaaacggaaacttggcccagaactttctacagca
ccagtaaagaaaaagaggggtccaaagcccaaaccaaaacccttaccacctcaaccacct
ttgctggaacaggttgtctctacacctaaagacaaggctgtcagaggccccagaagaaag
cgaggcccacctaagaaagtctctgtggttagtccggcacccaaagacactcatccaaac
atcactgagatggacatcgctagtgatgtgcctgtggtgcctcctcaatgtcccactaaa
acaaaagttctcccaccacgcaaaggcagaggacagaaatacgaggccatggtgcagaaa
attgcatccccaagctcaaagaaacacctcccaattcctcagatggacagcagtctaact
gatgatgtgacatccagggctttgcctcaacttgtcctgaaggaaggtgaaacatctatg
ctcataaataacattgaggtgatagagggagaagtgaaaagcatagattctagacaagaa
gtactgaaacacgaaggaacagtgagaaaaaaggagatggcacaagaaaaagaaacgtgt
gaggtgagtcaaaagacatcaacggcacaggaggtgagacaagggatggaagaagagatc
atgaataaggaggagaaaagagaaaaacacattaacccagggaaacagcaggatgtcagt
gctgacaaggcttggagctcaatagaggccccagttaaagtcgggtctccaggagagtgg
atacaacaggcctcagaaggtgtatcatctgctcccactaagtcctccagaactaaaagg
aagagatgggccatggtggagagcacagatgcctcagtagtagccttggaagcagggagc
ctaatagttacaacaccaaggctagccaagcagagggcgattaaaaacaaccatgagatg
catctgaaacagaggagaaagaaaagaaagggccaagcccctgtagacgaagagactgtt
gaggataaaaatattgaaacagtagaacagcaacaggagaaggtagaagagacgataacc
cccacagagtccacaataactctgccaatcagcgcagatgagatcacagaagccccccag
gtaaccagcacagaactcattcagaaacctaggagaggcagaaaaccatccgcaaatcca
actcagaggaaacgaggcaaagcctcatcagagcaggttcctggcaaaccaatgaaggtc
cacaaaaagcctgggccaaaacctgggatgaaagacgccatggaggttattgaggcagta
gtaagggctgcaggatgtgaaggggccgaaaaagaggaaagagaaaaagacgaaatggaa
agaagggaaagagaaaaggaggaaaaagcagaaacatgtaccgttggtcccgtagtaacg
ttatcagaaaaacagactgagatcctttctgtgaaaagaatcagacgcagaccagtccat
caaaattctaaactgtctttctgtccttacgtgcggattaacaactccagagacttctct
tcttggtgtgccatagtcaacaagcctgaggacgcagtggtatttcagagacgtagaaaa
aagggcatactcagaatgaggaatcctttcaccgttgcaaaagtagtgccacacactgct
gccatgcttcaaggacccttggtgaaaagagacctcattgacaggtgtcttacatgctgc
ctgtgtggaaagccagcaaattacagagacctaggtgatttgtgcggaccctactacaca
gaggatggcgttccacggaaaatgttgacgatcgggcacactgagtccgtcagggaggag
tcacagaaaactaatgacaacaacagtggcagcagtgaagaaccaagcaactcctcaaaa
gacgagggcgagggcagcacagaaaaggtggccaatgcagaggcttccactcaagagggc
agtagtagcaggcaccattggcactaccggcgggcagaaagaacagagaggatgggtcag
gagggtggtccaagaagattaactctccgagagaggttcaggaggatgaagcagctccag
gccatcagcacaggggcctcgagtgaccaggagggtggtgacagcatgttcagaaggcta
caagtggaggcagaggctaaagagcactgggcccatgaaaactgtgccatctggaccaag
ggggtaattatgatagctgggaggctatatggactgagggaggctgccaacaactcagcc
aaaacgagctgctacaagtgccagattgtgggggcgtccctcagctgctgttggagaggc
tgctctcataaataccactatgtctgcgccaaagagataggctgcacattccacgaggat
gatttctccataaaatgtcctaaacatgagtctcttttctctttttctacaggacctgta
agatattccttcaccacctccaccaccaacaccaccacctctcagccaagcaagcatcac
ctatccggcaaggcaaacaaagatgctgtcctaacagccacctacacccagaagacacgg
cgatga
DBGET
integrated database retrieval system
