Anoplopoma fimbria (sablefish): 129098665
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Entry
129098665 CDS
T09102
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129098665
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129098665
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129098665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
ANCHR-like_BBOX
PilJ
Muted
DUF7605
Motif
Other DBs
NCBI-GeneID:
129098665
NCBI-ProteinID:
XP_054463719
LinkDB
All DBs
Position
11:complement(11961239..11963752)
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AA seq
506 aa
AA seq
DB search
MATLSSNDEENLKESQHNVDVKEEPRDPATETPDTLLPQDVLCDSCMDSPSKALKSCQTC
LVSYCEAHLRPHLENAKFQNHRLVDPLHDIDCRTCEVHQRPLERFCLMDGCCVCLDCENQ
EHEGHATASVGEARTQIETELQKKQKEISQSASAAEIAIGKLQSNNDFIKSSVQEVCVSV
EQQFARLQTTVEEARKGVVDVLEGEQRKALRQAEGIQAHLEQRKTELMKTVSQMNKLSRS
KSDVDFLQEYSEWKKGVADVCLPSPYINRMAHLTSFVQGVTDSTQELCDLILSSYKEKLK
HICESVGTKSQMPESEHSRLPDPETREDFLQYTRSLTFDPDTTHHFLRVTEDNRKLTNTS
PWRHSYPDHPSRFKYWRQATTSDSLYLGRHYIEAELGGEGAHVGVTYNCIDCKGEQSTSC
ITGNDFSWCVGRNSRGFSAWHAGVETPLDITDITTLGLYVNFPRGSVSFYDASGPMKLLH
MYNADFMEPLYVIAWLSKKDNVVSLV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctactctcagcagtaatgatgaggagaacttgaaggagagtcagcacaacgtggac
gtaaaggaggagccgagggatccagccaccgagacgcccgacacgctgctccctcaggat
gtgttatgtgattcctgcatggacagccccagcaaggccctaaagtcctgccagacctgt
ctggtttcttactgcgaggcccatcttagaccccatctggagaacgccaaatttcaaaac
catcgtctggtggatcccctccacgacatcgattgtaggacttgtgaggttcatcaacgt
cctctcgagcgcttctgtctgatggatggctgctgtgtgtgtctggactgtgagaaccag
gagcacgaaggtcacgcgactgcatctgtcggggaggcacggacacagatcgagactgag
ctgcagaagaaacaaaaagagatcagtcaaagtgcctcagcagctgagatagcaattgga
aagctacagagtaacaatgactttattaagtcgtcagtgcaggaggtttgtgttagtgtt
gaacagcagtttgccaggctgcagacaaccgtggaggaggccagaaaaggggtggtggat
gtgctggagggagagcagagaaaggccctcagacaggcagagggcatccaggcacatctg
gagcagaggaaaacagagctgatgaaaactgtgtcccagatgaacaaactgtctcggagc
aagtctgatgtagacttcctgcaggagtattcagagtggaagaaaggcgttgcagatgta
tgtctgccgagtccctacatcaaccgcatggcccatctaacctctttcgtccagggagtg
actgattctacccaggagctgtgtgacctaatcctctcctcctacaaggaaaaactgaag
catatctgtgaaagtgtaggcactaaatcccagatgccagaatctgaacattcacgcctg
cctgatcctgagacgcgagaggactttttgcaatacacaaggagcttgacctttgaccca
gacaccacccatcatttcctacgtgtaacggaggacaacagaaagctgaccaacaccagc
ccatggcggcacagctacccagaccaccctagtcgcttcaagtactggcgtcaggccaca
acttcagacagcctttaccttgggaggcactacattgaagctgagctgggtggggagggg
gcacatgtgggagtcacgtacaactgcatcgactgtaagggagagcaaagcaccagctgc
atcaccgggaacgacttttcctggtgcgtgggaaggaacagccgaggtttctctgcctgg
cacgccggtgtggagacgcccttggatatcactgatattacaacacttggcttgtatgtc
aactttccccgaggctctgtgtctttttatgatgccagcggccctatgaagctgctccac
atgtacaacgctgatttcatggagcccttatatgttatagcctggctgtcaaaaaaagac
aatgtagtttctctcgtttaa
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