Anoplopoma fimbria (sablefish): 129098702
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Entry
129098702 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
afb00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
afb01100
Metabolic pathways
Module
afb_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
129098702
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
129098702
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afb01003
]
129098702
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
129098702
Glycosyltransferases [BR:
afb01003
]
O-Glycan biosynthesis
Glycosaminoglycan
129098702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
129098702
NCBI-ProteinID:
XP_054463759
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All DBs
Position
11:8654175..8683389
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AA seq
936 aa
AA seq
DB search
MTGNPCARRLARRSKSALLIAALAVLLVQTLIVWNFSNLDSAAGDGGARSREKREERAAG
GLNKADGRAPRRGLQKKGDPPPPLGKAAVRHKLQADVYHSHRPKEKLRLDSNNNENSVPK
DFDTIDSNSNLGARSQRQRVPLANAKRKLDKAQAQSMMGKSANEVLKFPPVQPRGLGHNH
NRTHVRKPHPQVPTVPAPVQGSNQDPVLYQVKKSSTPLPPGLEPRKEHLQCEISGKEAIS
ALSRAKSRECRQQIVEVYCKHKDRALMPEKVPRYCPIEGKANVNVQWDEAPSEAAQLVPA
RIAFVLVVHGRASRQFQRLFKAIYHTSHYYYIHVDLRSNYLYREILTLAGRYPNVRVTPW
RMSTIWGGASLLTMYLRSMEDLLQMSDWSWDFFINLSAADYPIRTNEQLVAFLSKYRNMN
FIKSHGRDNARFIRKQGLDRLFYECDTHMWRLGDRKIPEGIAVDGGSDWFLLNRAFVDYV
VNSRDELVGSMKRFYAYTLLPAESFFHTVLENSAHCETMVDNNLRLTNWNRKLGCKCQYK
HIVDWCGCSPNDFKPSDLPRFQQASRPTFFARKFEASVSQEIINQLDSYLFGSYASGTLG
LHAYWENIYEQETDGLASLSDSMLSHFHVFARMGLSRAASSLQGHPNDNSCRFMAMNHPV
SVHLYFLSDQFQGYLVRHVFTNRASTQLESLETWVTPKDHFTLASPTQPTNRLQHVQVGA
DWDPKERLFRNWGGLLGPTDEPVAVQRWSRSQSNLTATVVWIDPTNVIAATYDILVDASA
EVTHYRPPLSPPLRPGLWTLRVLHHWNPLGQTTFIVAPLEFHRQRPLLQEDALRLHGGPA
RNSYMEQSFHGLNPVLRLPVSLGAVEEAEANAGLTGXPLQRWLDGLLEGHWSAADVCSMG
PSVCPVMQRCRHTVWSSASPDSKSELNPPRDDGRIR
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggaacccgtgtgcccgcaggctggcccggcgctccaagtcggcgctgctgatc
gccgctctggccgtcctgctggtccagactctcatcgtgtggaacttcagcaatctggac
tccgccgccggggacggaggcgccaggagccgggagaagagagaggagcgagccgccggg
ggtctcaacaaagccgacggtcgtgctcctcggagggggctgcagaagaagggagacccg
ccgccgccgctcggaaaggcggccgttcggcacaagctgcaggcggacgtctaccattcc
caccggcccaaagagaaacttcgcttggatagcaacaacaatgagaactctgtccctaaa
gactttgacaccatcgacagcaacagcaaccttggagctcgatctcaacgccagcgagta
ccgttagcaaacgccaaacgcaagctggacaaggcacaagcacaaagcatgatgggaaaa
tctgccaacgaggtcctcaagttccctcctgtccaaccgagagggctgggccacaatcac
aaccgcacccacgtccgtaaaccccacccccaggtgccgacggtcccggcaccggtccag
gggtccaatcaggatccagttctctaccaggtgaagaagtcgtccacgccgctgccgccc
ggtttggagccaaggaaggagcatctgcagtgtgagatcagcgggaaggaagccatttct
gctctgtccagagccaagagccgagagtgtcgtcagcagatagtggaggtctactgcaaa
cacaaagacagagcactaatgcctgagaaagtgcctcgctactgccccatagaaggtaaa
gctaatgtcaacgtacagtgggacgaggccccctcagaagctgcccagctcgtcccggca
cggatcgcctttgtcctggtggtccacggccgagcctcgcgccagttccagcgtctcttc
aaagctatctaccacacctcgcactactactacatccacgtagacctgaggtccaactac
ctctacagagagatcctgactctggccggccggtaccccaacgtccgggtgactccctgg
aggatgtccaccatctggggcggggccagcctgttgacaatgtacctacgcagcatggag
gacctgctccaaatgtccgactggtcctgggacttcttcatcaacctcagcgctgcagac
taccccatcaggaccaatgaacagctggtggctttcctgtccaagtaccgcaacatgaac
ttcatcaaatctcacggcagagacaacgcacgcttcatccgtaaacagggtctggaccgc
ctcttctacgagtgtgacacccacatgtggcgtctcggggaccgcaagatcccagagggc
attgcggtggacggaggctccgattggttcctgctcaaccgggcctttgtggactacgtg
gtcaactccagagacgagctggtcggcagcatgaagcgcttctacgcctacacactgctg
cctgccgagtcgtttttccacaccgtgctggagaacagcgcccactgtgagaccatggtg
gacaacaacctgaggctcaccaactggaaccgcaaactgggatgtaaatgccagtacaag
catattgtcgactggtgtggctgctcacccaacgacttcaagccctcggatctgccacgc
ttccagcaagcgtccagaccaaccttctttgccaggaagtttgaggccagcgtcagtcag
gagatcatcaaccagctggactcctacctgtttggatcgtacgcctcaggcaccctgggg
ctccacgcctactgggaaaacatctatgagcaggagacggacggcctcgccagcctatcg
gactccatgctcagccatttccacgtcttcgcccggatgggactgtcgcgcgccgccagc
tcgctgcagggccatcccaatgacaacagctgcaggttcatggccatgaaccacccagtg
tcggtccacctttacttcctctcagaccagttccagggctacctggtgcgtcacgttttc
actaaccgagcctccacgcagctggagagcctggagacctgggtgacacctaaagatcac
ttcaccctggccagccccacccaacccaccaacaggctgcaacatgtacaggtaggggcg
gactgggatcccaaggagcgtctcttcaggaactgggggggtttactggggcccacggac
gagccggtggccgtacagcgctggagccgaagccagagcaacctgacggccactgtggtg
tggatcgaccccaccaacgtaatcgctgccacctacgacatcctagtagacgcctctgca
gaggtcacccactatcggcccccgctcagcccaccgctgaggcccgggttgtggacgcta
agagtgctgcaccactggaacccactgggacagaccaccttcatcgtggctccgctcgag
ttccaccgacaacggcctttactgcaagaggatgctctgcggttgcacggcggcccggcc
aggaactcctacatggagcagagtttccacggcctgaacccggtgctgcggctgccggtg
agcctgggcgccgtggaggaggccgaggccaacgccggcctgacggggncgccgctgcag
cgctggctggacgggctgctggagggccactggtcggccgcagacgtctgctccatggga
cccagcgtctgtcccgtcatgcagcgctgccgtcacaccgtgtggagttctgccagcccc
gacagcaaatctgaactgaacccgcccagagacgacggacggatcaggtag
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