Anoplopoma fimbria (sablefish): 129098793
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Entry
129098793 CDS
T09102
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
afb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129098793
03015 mRNA surveillance pathway
129098793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129098793
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129098793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_3
RRM_7
RRM_occluded
RRM_5
RBD_AKAP-17A
RRM_MUD2_C
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129098793
NCBI-ProteinID:
XP_054463873
LinkDB
All DBs
Position
11
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AA seq
277 aa
AA seq
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MAPSPTKRKEEEKTKDRGKEKTGTKEGDKERGRDKARKRRSASTGSSTSRSSSSSSSSSG
SSSGSSSGSSSSGSSRSGSSSSRSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGDDKE
RRKRSPSPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMVDMPMDRVHPHLSRGYAYVEF
ETPDEAQKALKHMDGGQIDGQEISASAVLTQRVRPPPRRPSPPRRMPPPPPMWRRSPPRM
RRRSRSPRRRSPPRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcggaaggaggaggaaaaaacaaaagacagaggcaaagaa
aagactggtaccaaggaaggagataaggagagaggacgggataaagctaggaaacgtcgc
agcgcctccaccggcagcagtaccagcagatctagctcctcttcaagcagcagctctggt
tcgagctcaggttcctcaagtggatccagctcatctggatccagccgctctggttcttca
agctctcgttcctcatcttccagctcctcaggctcccccagccccagccgtagacgccat
gacaaccgccgccgatcccgctcagcgtccaaaacacagaagaggggagatgacaaggag
agaaggaaaagaagcccaagccccaaaccaactaaagttcacttagggcggctgaccagg
aatgtcaccaaggaccacatccaggagatcttttccacttatggaaaaatcaaaatggtc
gatatgccaatggacagggtccacccacacctgtccaggggctacgcttatgtggagttt
gagactcccgatgaggcccagaaggccctcaaacacatggatggaggtcagattgatgga
caggaaatcagtgcatctgccgtgctgactcaacgagttcgccctccacctcgtagacct
tctccccctcgcagaatgcccccaccaccacctatgtggcgtcgcagtccaccacgcatg
aggagaaggtcccgctccccgaggaggcggtccccaccacgccgccgctctcgctccaga
tctcctggtcgcaggcgccaccgttctcgctccagctctaactcctccagatag
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