Anoplopoma fimbria (sablefish): 129098817
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Entry
129098817 CDS
T09102
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129098817 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129098817 (nup85)
03036 Chromosome and associated proteins [BR:
afb03036
]
129098817 (nup85)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129098817 (nup85)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129098817 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
129098817
NCBI-ProteinID:
XP_054463899
LinkDB
All DBs
Position
11:complement(1117729..1124671)
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AA seq
653 aa
AA seq
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MMEEVDVEPAVTNIPAASAGKHLGFAWGPGDILVYETLYKASDAKGSGCSFIHEVRKDED
IYSPILRKLFNESHHIFVGLQTIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TKDAEVATQYGNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKAR
EVLQSESPAEHHDYWDVVVSYVLQGRLEEARQMLVKQATLHPAARNMYKLMDTLLSKMPF
YNPGGNQTLTEFDVKWRHWHDEVNRCLQDNSFASNQHLEIICKILVGDEDTLLDHKDLLS
TWYHFLVTRLLFSHPTVKPTELHYYAQSCLTMFLDSRSVPEPLDSILLAAFEFDIHQVIK
DCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVTLDTERKALKVLRICEQRQMSEQVRSICKIMAMRALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYCTRGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHKLYGEKRFSEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTHELMF
CLEELTSSLNTTAPSKDKPAQDEDIEVIKVELLRLALARNLAMAIVKEGTVEA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggtggacgtggagccggcggtcacgaatattcctgcagccagtgctggg
aagcatttgggatttgcatggggtccaggtgacatccttgtgtatgagaccctttacaaa
gcctcagatgctaaaggatcaggctgctccttcatccatgaagtcaggaaagatgaggat
atatattcccccatcttacgcaaactcttcaatgagtcccatcacatctttgttggcctg
cagacgattagagaggacctccccagcaagaacaaaaaaccccaattcgtcagcatcagt
aagaactatagatctgtgatacgagcgtgtatggaggagcttcagcaagtcgcagtttct
acaaaagatgcagaagtagccacgcaatatggaaatcaggtgtccattctgttggccata
gaactgatctggaatctgtgtgaagtgctgttcatcgatgctgctcctgcgggttccctg
ttgctccacctcctagactgggtgaggttacacaaggctgatgtggatgagaaggccaga
gaagtgctgcaaagtgagagccctgctgagcaccacgactactgggatgtggtggtgagc
tatgtgctgcagggcaggttggaagaagccagacagatgctggtgaagcaggccaccctg
caccctgctgccaggaacatgtacaagctgatggacacgttgctcagcaagatgccattc
tacaatcctggtggcaaccagacgctgacagagtttgatgtgaagtggagacactggcat
gacgaggtgaaccgctgcctgcaggacaactcgtttgccagcaatcaacacctggagatc
atctgcaagatcctagtgggggatgaagacacgttgctggatcacaaggacctactgagc
acctggtaccacttcctggtcactagactgctcttcagccaccccacagtcaaacccact
gagttacattactatgcacagtcatgcttgacgatgtttctggactcgaggagcgtccca
gagcctctggacagcatcctactggctgcctttgagtttgacatccatcaggtcatcaag
gactgcagcattgctctcaacaactggtggtttgtggcccatttgacagatctgttggat
cattgcaaactccttcagtctcacaatctacacttcggctccaacttgagagagttcctc
ctgttagaatacgcttctggtctcttcactcatcacagtctgtggcagttggccgtggac
tacttcgaccactgcccagagtttggccgtgtctacctggagctgcagattgagcgtgtt
actttggacacagagcgtaaagccctcaaggtgctgaggatctgtgagcagaggcaaatg
tcagagcaagtgcggagtatctgtaagatcatggctatgcgagccctgaggaacaacaga
ctgggctctgctctctcctggagcatcagggccaaagacgctgcctttgcaacactaatt
tcagaaaggtttctacaggactactgcaccagagggaccttctctgatttggacctgata
gacaacttgggtccagcgatgctgctcagcgacaggctcactttccttgggaagtatcgt
gagttccacaagctgtacggggagaagcgcttcagcgaggcggccaagctgctcctctcc
ctcatgacggccaagatcgccccccggagcttctggatgacgctgctgaccgacgccctg
ccgctgctggagcagaaagaggtgatcttctcagcagaccaaacccatgagctgatgttc
tgtttggaggagctcacctcctctctgaacaccacagctcccagcaaagacaagcccgcg
caggatgaagacatagaggtgattaaagtggagctcctgagactcgccctggcccggaat
ctggccatggccatcgtcaaagagggaactgtggaagcgtga
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