Anoplopoma fimbria (sablefish): 129098838
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Entry
129098838 CDS
T09102
Name
(RefSeq) protein Tob2
KO
K14443
protein Tob/BTG
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129098838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129098838
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129098838
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129098838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
129098838
NCBI-ProteinID:
XP_054463928
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All DBs
Position
11:23588034..23596233
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AA seq
398 aa
AA seq
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MHLEVKVALNFIVSYLYNKLPRRRADLFGEELERILMSRFEGHWYPEAPLRGSAFRCIHL
GAPRDPVVELAAKRSGLDTEEVRANVPAELSVWIDPYEVSYQIGEKGAVKVLYLEDPPGL
GCDSERAEGVIREGDAEAEEAKSLGFNPDAQVFVPIGSQASPTLMPALSNSPTPLSAPSC
PGLFSYPSSSTPTDPAAHSSNTSSPSPPSGGLPYLSAQQPPSALPAARPQPITFTTASFA
ATKFGSTKMKKCSGAGSAASSGAAIPPTQRMLTRSPTTISAPDLLKHKPLSLSLHSLVGP
IASQLSPNAKEFVYPGSPGPLYFDADTQPMQPLASPFQPLNTHPSFDPFSSPPPAQSVGI
IGSNGGIPYMEKPPFVEGLGSYNLQYPSQSFQPVVLAN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggaggtgaaggtcgccctgaacttcatcgtgtcctacctgtacaacaagctg
cctcggcgtcgagctgacctgtttggcgaggaactggagaggatactgatgtctcgtttc
gagggtcactggtaccctgaagcacctctcaggggctccgccttccgctgcattcacctg
ggagcaccgagggaccccgtggtggagttggcggcaaagagaagcggactggacacggag
gaagtgcgtgcaaacgttcccgcagagctcagcgtgtggattgacccttacgaggtatcc
taccagattggggagaagggggcagtgaaggttctctacctcgaggaccctcctggcctt
ggttgtgacagcgagagggccgagggggtgatcagagagggtgatgcagaggcggaggag
gccaagagtctgggctttaacccagacgctcaggtgtttgtgccaattggaagccaggcg
tctcccaccctcatgccggcgctctctaactctcccacacctctgtcggccccgtcctgc
cccggtctcttcagttaccccagctcaagcacgcccaccgaccccgccgcccactcctca
aacacctcctccccttctcctcccagcggcgggctgccctacctctccgctcagcagccg
ccctccgctcttcccgcggcccgtcctcagcccatcacattcaccaccgccagcttcgcc
gccaccaaattcggctcgaccaagatgaagaagtgcagcggggccgggtcggcggctagc
tccggggccgccataccgcccacccagaggatgctcacccgctctcccaccaccatctcg
gcaccagatctgctcaagcacaagcccctgtctctctccttgcactccctcgtaggtccc
atcgccagccagctctcccccaacgccaaagagttcgtctacccaggatccccgggcccc
ctttactttgatgctgacacccagcccatgcagcctcttgctagcccgttccaacccctc
aacacccatccgtcctttgaccccttctccagccctccccctgcccagagtgtgggcatc
attggcagcaacggagggatcccctacatggagaagccgccattcgtcgagggtttagga
agctacaacctgcaatatcccagccagtccttccagcccgttgtgctggccaactaa
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